RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 BOP1Q14137 746 aaKnown RBP13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 NR1D2Q14995 579 aa13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 CLCA4Q14CN2 919 aa13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 RPE65Q16518 533 aa13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 TYSND1Q2T9J0 566 aa13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 MAP9Q49MG5 647 aa13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 DNTTIP2Q5QJE6 756 aaKnown RBP13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 KCNMB4Q86W47 210 aa13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 ZNF761Q86XN6 746 aaPredicted RBP13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 CILP2Q8IUL8 1156 aa13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 CACTIN-AS1Q8N1I8 211 aa13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 TMEM159Q96B96 161 aa13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 C12orf66Q96MD2 445 aa13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 PPANQ9NQ55 473 aaKnown RBP13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 IMP3Q9NV31 184 aaKnown RBP13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 INTS10Q9NVR2 710 aaKnown RBP13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 ZNF624Q9P2J8 865 aaPredicted RBP13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 MSRB2Q9Y3D2 182 aa13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 PCDHB1Q9Y5F3 818 aa13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 HEBP2Q9Y5Z4 205 aa13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 SPEGQ15772 3267 aa13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 ARHGEF17Q96PE2 2063 aaPredicted RBP13.73□□□□□ -0.21
GTF3C3-206ENST00000448539 A0A1W2PQM1 296 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 C1QTNF9BB2RNN3 333 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 H3BMM5 538 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 NTN3O00634 580 aaPredicted RBP13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 CSO75390 466 aaKnown RBP13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 APOA4P06727 396 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 PROS1P07225 676 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 C1QTNF9P0C862 333 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 MTHFD1P11586 935 aaKnown RBP13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 RPS3P23396 243 aaKnown RBP eCLIP13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 FMO4P31512 558 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 MAPK9P45984 424 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 GPLD1P80108 840 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 GUCY2DQ02846 1103 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 BRD3Q15059 726 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 TMED2Q15363 201 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 CLPPQ16740 277 aaPredicted RBP13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 GLE1Q53GS7 698 aaKnown RBP13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 HSP90AA5PQ58FG0 334 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 CDCP2Q5VXM1 449 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 UNQ6494/PRO21346Q6UXR6 183 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 CCNI2Q6ZMN8 369 aaPredicted RBP13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 TMEM26Q6ZUK4 368 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 PIM3Q86V86 326 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 ANKMY2Q8IV38 441 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 IGDCC3Q8IVU1 814 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 ZBED8Q8IZ13 594 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 LILRA3Q8N6C8 439 aaPredicted RBP13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 DCBLD1Q8N8Z6 715 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 FBXO36Q8NEA4 188 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 GSDMBQ8TAX9 411 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 ART4Q93070 314 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 DPYSL5Q9BPU6 564 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 CARD6Q9BX69 1037 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 CCDC68Q9H2F9 335 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 EPB41L1Q9H4G0 881 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 UCK1Q9HA47 277 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 IARS2Q9NSE4 1012 aaKnown RBP13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 GRHL1Q9NZI5 618 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 CRYL1Q9Y2S2 319 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 CFAP20Q9Y6A4 193 aaKnown RBP13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 TEX264Q9Y6I9 313 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 COLEC10Q9Y6Z7 277 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 CACNA1BQ00975 2339 aa13.72□□□□□ -0.21
GTF3C3-206ENST00000448539 CFAP47Q6ZTR5 3102 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 CEP295Q9C0D2 2601 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 AKAP13Q12802 2813 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 IGHV1OR21-1A0A087WYE8 117 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 FAM221BA6H8Z2 402 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 IQCF5A8MTL0 148 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 D6RAR5 112 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 E7ESA3 106 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 TMX2-CTNND1H3BSU7 103 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 KPNA5O15131 536 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 TP73O15350 636 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 EIF3HO15372 352 aaKnown RBP eCLIP13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 B4GAT1O43505 415 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 DUX1O43812 170 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 CPNE6O95741 557 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 ESR1P03372 595 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 ERVK-10P10266 1014 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 AMD1P17707 334 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 NDUFS1P28331 727 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 PREPP48147 710 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 EPHA4P54764 986 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 CTBP1Q13363 440 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 PLCL1Q15111 1095 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 UNC5AQ6ZN44 842 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 USP53Q70EK8 1073 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 OTOAQ7RTW8 1153 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 MARCH9Q86YJ5 346 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 PALM2Q8IXS6 379 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 KRT222Q8N1A0 295 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 PYROXD1Q8WU10 500 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 ASZ1Q8WWH4 475 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 LPGAT1Q92604 370 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 GRAMD1AQ96CP6 724 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 CERS2Q96G23 380 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms