RNA–Protein interactions for RNA: ENST00000447609.5

LMO3-209, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-209ENST00000447609 VPS39Q96JC1 886 aa5.4□□□□□ -1.55
LMO3-209ENST00000447609 NSMCE2Q96MF7 247 aa5.4□□□□□ -1.55
LMO3-209ENST00000447609 AGAP4Q96P64 663 aa5.4□□□□□ -1.55
LMO3-209ENST00000447609 CDK5RAP1Q96SZ6 601 aaKnown RBP5.4□□□□□ -1.55
LMO3-209ENST00000447609 UGT2B28Q9BY64 529 aa5.4□□□□□ -1.55
LMO3-209ENST00000447609 DUSP16Q9BY84 665 aa5.4□□□□□ -1.55
LMO3-209ENST00000447609 RHOJQ9H4E5 214 aa5.4□□□□□ -1.55
LMO3-209ENST00000447609 KAT8Q9H7Z6 458 aaKnown RBP5.4□□□□□ -1.55
LMO3-209ENST00000447609 MARCH5Q9NX47 278 aa5.4□□□□□ -1.55
LMO3-209ENST00000447609 MARCH2Q9P0N8 246 aa5.4□□□□□ -1.55
LMO3-209ENST00000447609 RCOR3Q9P2K3 495 aaPredicted RBP5.4□□□□□ -1.55
LMO3-209ENST00000447609 ZDHHC2Q9UIJ5 367 aa5.4□□□□□ -1.55
LMO3-209ENST00000447609 MAGEL2Q9UJ55 1249 aa5.4□□□□□ -1.55
LMO3-209ENST00000447609 SLC39A10Q9ULF5 831 aa5.4□□□□□ -1.55
LMO3-209ENST00000447609 BTBD3Q9Y2F9 522 aa5.4□□□□□ -1.55
LMO3-209ENST00000447609 GNGT2O14610 69 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 SLC9A3R1O14745 358 aaPredicted RBP5.39□□□□□ -1.55
LMO3-209ENST00000447609 TLR5O60602 858 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 METTL18O95568 372 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 LTFP02788 710 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 RBP1P09455 135 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 HNRNPA1P09651 372 aaKnown RBP eCLIP5.39□□□□□ -1.55
LMO3-209ENST00000447609 ERVK-10P10266 1014 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 PAMP19021 973 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 ATP6V1B2P21281 511 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 NR4A1P22736 598 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 CRHBPP24387 322 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 RECQLP46063 649 aaPredicted RBP5.39□□□□□ -1.55
LMO3-209ENST00000447609 NTHL1P78549 312 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.39□□□□□ -1.55
LMO3-209ENST00000447609 GALNT1Q10472 559 aaPredicted RBP5.39□□□□□ -1.55
LMO3-209ENST00000447609 CDK10Q15131 360 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 FAM83EQ2M2I3 478 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 C6orf141Q5SZD1 244 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.39□□□□□ -1.55
LMO3-209ENST00000447609 TMEM198Q66K66 360 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 PNCKQ6P2M8 343 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 NAPRTQ6XQN6 538 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 ATG14Q6ZNE5 492 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 CYP4V2Q6ZWL3 525 aaPredicted RBP5.39□□□□□ -1.55
LMO3-209ENST00000447609 R3HCC1LQ7Z5L2 792 aaKnown RBP5.39□□□□□ -1.55
LMO3-209ENST00000447609 ZBTB46Q86UZ6 589 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 ZDHHC17Q8IUH5 632 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 SPPL2CQ8IUH8 684 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 GALNT12Q8IXK2 581 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 ELMOD2Q8IZ81 293 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 LGI2Q8N0V4 545 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 PELI3Q8N2H9 469 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 MPP5Q8N3R9 675 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 TOR1AIP2Q8NFQ8 470 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 ZFP90Q8TF47 636 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 ZHX1-C8orf76Q96EF9 292 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 MARK4Q96L34 752 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 CEP19Q96LK0 163 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 ZBP1Q9H171 429 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 IRF2BPLQ9H1B7 796 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 DSN1Q9H410 356 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 UBE2ZQ9H832 354 aaPredicted RBP5.39□□□□□ -1.55
LMO3-209ENST00000447609 MEAF6Q9HAF1 191 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 OLA1Q9NTK5 396 aaKnown RBP5.39□□□□□ -1.55
LMO3-209ENST00000447609 COMMD8Q9NX08 183 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 STOML2Q9UJZ1 356 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 MKLN1Q9UL63 735 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 RABL2BQ9UNT1 228 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 AP3M1Q9Y2T2 418 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 TIMM22Q9Y584 194 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 PEX16Q9Y5Y5 336 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 SNTNA6NMZ2 147 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 CCRL2O00421 344 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 NR5A2O00482 541 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 ARPC2O15144 300 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 ZW10O43264 779 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 ICMTO60725 284 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 RHOP08100 348 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 XPAP23025 273 aaPredicted RBP5.39□□□□□ -1.55
LMO3-209ENST00000447609 MZF1P28698 734 aaPredicted RBP5.39□□□□□ -1.55
LMO3-209ENST00000447609 ETFBP38117 255 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 ARSFP54793 590 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 KCNK10P57789 538 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 ST8SIA6P61647 398 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 ITKQ08881 620 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 SPANXN2Q5MJ10 180 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 CCNJQ5T5M9 372 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 AGAP9Q5VTM2 703 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 SDE2Q6IQ49 451 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 ZNF534Q76KX8 674 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 PAGE2Q7Z2X7 111 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 SPRED2Q7Z698 418 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 KCNMB4Q86W47 210 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 ADGRG5Q8IZF4 528 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 MFSD4AQ8N468 514 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 ARL14EPQ8N8R7 260 aaPredicted RBP5.39□□□□□ -1.55
LMO3-209ENST00000447609 PAPD5Q8NDF8 572 aaKnown RBP5.39□□□□□ -1.55
LMO3-209ENST00000447609 OR10T2Q8NGX3 314 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 NXNL1Q96CM4 212 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 ZNF689Q96CS4 500 aaPredicted RBP5.39□□□□□ -1.55
LMO3-209ENST00000447609 HSFY1Q96LI6 401 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 PPP1R2P1Q96PQ5 205 aa5.39□□□□□ -1.55
LMO3-209ENST00000447609 RBM4BQ9BQ04 359 aaKnown RBP5.39□□□□□ -1.55
LMO3-209ENST00000447609 CLSTN3Q9BQT9 956 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms