RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 SDCCAG8Q86SQ7 713 aaPredicted RBP23.45■■□□□ 1.34
C9orf3-207ENST00000445181 STAMBPL1Q96FJ0 436 aa23.45■■□□□ 1.34
C9orf3-207ENST00000445181 FOXP3Q9BZS1 431 aa23.45■■□□□ 1.34
C9orf3-207ENST00000445181 EPB41L5Q9HCM4 733 aa23.45■■□□□ 1.34
C9orf3-207ENST00000445181 IMP3Q9NV31 184 aaKnown RBP23.45■■□□□ 1.34
C9orf3-207ENST00000445181 COL27A1Q8IZC6 1860 aaPredicted RBP23.45■■□□□ 1.34
C9orf3-207ENST00000445181 A0A1W2PNU3 283 aaPredicted RBP23.44■■□□□ 1.34
C9orf3-207ENST00000445181 SMAPO00193 183 aa23.44■■□□□ 1.34
C9orf3-207ENST00000445181 PFDN6O15212 129 aa23.44■■□□□ 1.34
C9orf3-207ENST00000445181 DUX1O43812 170 aa23.44■■□□□ 1.34
C9orf3-207ENST00000445181 NDUFS3O75489 264 aa23.44■■□□□ 1.34
C9orf3-207ENST00000445181 TUBB4AP04350 444 aa23.44■■□□□ 1.34
C9orf3-207ENST00000445181 GSTM1P09488 218 aa23.44■■□□□ 1.34
C9orf3-207ENST00000445181 ARNTP27540 789 aa23.44■■□□□ 1.34
C9orf3-207ENST00000445181 CD1CP29017 333 aa23.44■■□□□ 1.34
C9orf3-207ENST00000445181 ITGA8P53708 1063 aa23.44■■□□□ 1.34
C9orf3-207ENST00000445181 INHBCP55103 352 aa23.44■■□□□ 1.34
C9orf3-207ENST00000445181 GSTM4Q03013 218 aa23.44■■□□□ 1.34
C9orf3-207ENST00000445181 RPE65Q16518 533 aa23.44■■□□□ 1.34
C9orf3-207ENST00000445181 LILRA3Q8N6C8 439 aaPredicted RBP23.44■■□□□ 1.34
C9orf3-207ENST00000445181 SIGLEC10Q96LC7 697 aa23.44■■□□□ 1.34
C9orf3-207ENST00000445181 C12orf66Q96MD2 445 aa23.44■■□□□ 1.34
C9orf3-207ENST00000445181 TMEM74Q96NL1 305 aa23.44■■□□□ 1.34
C9orf3-207ENST00000445181 STRADBQ9C0K7 418 aa23.44■■□□□ 1.34
C9orf3-207ENST00000445181 COG4Q9H9E3 785 aa23.44■■□□□ 1.34
C9orf3-207ENST00000445181 CDC23Q9UJX2 597 aa23.44■■□□□ 1.34
C9orf3-207ENST00000445181 CFAP20Q9Y6A4 193 aaKnown RBP23.44■■□□□ 1.34
C9orf3-207ENST00000445181 FAM187AA6NFU0 413 aa23.43■■□□□ 1.34
C9orf3-207ENST00000445181 TMX2-CTNND1H3BSU7 103 aa23.43■■□□□ 1.34
C9orf3-207ENST00000445181 KIF2AO00139 706 aaPredicted RBP23.43■■□□□ 1.34
C9orf3-207ENST00000445181 SEC31AO94979 1220 aaKnown RBP23.43■■□□□ 1.34
C9orf3-207ENST00000445181 RBMS1P29558 406 aaKnown RBP23.43■■□□□ 1.34
C9orf3-207ENST00000445181 PDX1P52945 283 aa23.43■■□□□ 1.34
C9orf3-207ENST00000445181 ERVPABLB-1P60509 514 aa23.43■■□□□ 1.34
C9orf3-207ENST00000445181 DHX9Q08211 1270 aaKnown RBP23.43■■□□□ 1.34
C9orf3-207ENST00000445181 THOC5Q13769 683 aaKnown RBP23.43■■□□□ 1.34
C9orf3-207ENST00000445181 CLPPQ16740 277 aaPredicted RBP23.43■■□□□ 1.34
C9orf3-207ENST00000445181 BBS9Q3SYG4 887 aa23.43■■□□□ 1.34
C9orf3-207ENST00000445181 SYTL3Q4VX76 610 aa23.43■■□□□ 1.34
C9orf3-207ENST00000445181 PHF19Q5T6S3 580 aa23.43■■□□□ 1.34
C9orf3-207ENST00000445181 TMEM26Q6ZUK4 368 aa23.43■■□□□ 1.34
C9orf3-207ENST00000445181 B3GNT8Q7Z7M8 397 aa23.43■■□□□ 1.34
C9orf3-207ENST00000445181 RBM12BQ8IXT5 1001 aaKnown RBP23.43■■□□□ 1.34
C9orf3-207ENST00000445181 PDIK1LQ8N165 341 aa23.43■■□□□ 1.34
C9orf3-207ENST00000445181 AGGF1Q8N302 714 aaeCLIP23.43■■□□□ 1.342e-12■■■■■ 29.4
C9orf3-207ENST00000445181 ELMO1Q92556 727 aa23.43■■□□□ 1.34
C9orf3-207ENST00000445181 FCRL3Q96P31 734 aaPredicted RBP23.43■■□□□ 1.34
C9orf3-207ENST00000445181 NUDT22Q9BRQ3 303 aa23.43■■□□□ 1.34
C9orf3-207ENST00000445181 TSSK1BQ9BXA7 367 aa23.43■■□□□ 1.34
C9orf3-207ENST00000445181 TBC1D10AQ9BXI6 508 aa23.43■■□□□ 1.34
C9orf3-207ENST00000445181 SLC40A1Q9NP59 571 aa23.43■■□□□ 1.34
C9orf3-207ENST00000445181 ASCL3Q9NQ33 180 aa23.43■■□□□ 1.34
C9orf3-207ENST00000445181 SNX24Q9Y343 169 aa23.43■■□□□ 1.34
C9orf3-207ENST00000445181 PIKFYVEQ9Y2I7 2098 aa23.43■■□□□ 1.34
C9orf3-207ENST00000445181 UBA6A0AVT1 1052 aaPredicted RBP23.42■■□□□ 1.34
C9orf3-207ENST00000445181 PRMT5O14744 637 aaPredicted RBP23.42■■□□□ 1.34
C9orf3-207ENST00000445181 NDC80O14777 642 aa23.42■■□□□ 1.34
C9orf3-207ENST00000445181 RAD51CO43502 376 aa23.42■■□□□ 1.34
C9orf3-207ENST00000445181 USP1O94782 785 aa23.42■■□□□ 1.34
C9orf3-207ENST00000445181 MTHFD1P11586 935 aaKnown RBP23.42■■□□□ 1.34
C9orf3-207ENST00000445181 PGAM1P18669 254 aa23.42■■□□□ 1.34
C9orf3-207ENST00000445181 ARCN1P48444 511 aaKnown RBP23.42■■□□□ 1.34
C9orf3-207ENST00000445181 EPHA4P54764 986 aa23.42■■□□□ 1.34
C9orf3-207ENST00000445181 PCBP4P57723 403 aaKnown RBP23.42■■□□□ 1.34
C9orf3-207ENST00000445181 KRT33BQ14525 404 aa23.42■■□□□ 1.34
C9orf3-207ENST00000445181 PTRHD1Q6GMV3 140 aaKnown RBP23.42■■□□□ 1.34
C9orf3-207ENST00000445181 HIBCHQ6NVY1 386 aaPredicted RBP23.42■■□□□ 1.34
C9orf3-207ENST00000445181 NEPROQ6NW34 567 aa23.42■■□□□ 1.34
C9orf3-207ENST00000445181 FOXR1Q6PIV2 292 aa23.42■■□□□ 1.34
C9orf3-207ENST00000445181 TMEM135Q86UB9 458 aa23.42■■□□□ 1.34
C9orf3-207ENST00000445181 ZNF248Q8NDW4 579 aa23.42■■□□□ 1.34
C9orf3-207ENST00000445181 WDR36Q8NI36 951 aaKnown RBP23.42■■□□□ 1.34
C9orf3-207ENST00000445181 SLC46A1Q96NT5 459 aa23.42■■□□□ 1.34
C9orf3-207ENST00000445181 INSM2Q96T92 566 aaPredicted RBP23.42■■□□□ 1.34
C9orf3-207ENST00000445181 UCK1Q9HA47 277 aa23.42■■□□□ 1.34
C9orf3-207ENST00000445181 THSD1Q9NS62 852 aa23.42■■□□□ 1.34
C9orf3-207ENST00000445181 IL1RAPL1Q9NZN1 696 aa23.42■■□□□ 1.34
C9orf3-207ENST00000445181 PCDHGA8Q9Y5G5 932 aa23.42■■□□□ 1.34
C9orf3-207ENST00000445181 CCDC187A0A096LP49 1063 aa23.41■■□□□ 1.34
C9orf3-207ENST00000445181 PRAMEF33A0A0G2JMD5 474 aa23.41■■□□□ 1.34
C9orf3-207ENST00000445181 LILRA5A6NI73 299 aa23.41■■□□□ 1.34
C9orf3-207ENST00000445181 IFRD1O00458 451 aaPredicted RBP23.41■■□□□ 1.34
C9orf3-207ENST00000445181 BANF1O75531 89 aa23.41■■□□□ 1.34
C9orf3-207ENST00000445181 ITGB6P18564 788 aa23.41■■□□□ 1.34
C9orf3-207ENST00000445181 PREPP48147 710 aa23.41■■□□□ 1.34
C9orf3-207ENST00000445181 RPA4Q13156 261 aa23.41■■□□□ 1.34
C9orf3-207ENST00000445181 BOP1Q14137 746 aaKnown RBP23.41■■□□□ 1.34
C9orf3-207ENST00000445181 GPR18Q14330 331 aa23.41■■□□□ 1.34
C9orf3-207ENST00000445181 BRD3Q15059 726 aa23.41■■□□□ 1.34
C9orf3-207ENST00000445181 LONRF1Q17RB8 773 aa23.41■■□□□ 1.34
C9orf3-207ENST00000445181 WHAMMP3Q1A5X7 153 aa23.41■■□□□ 1.34
C9orf3-207ENST00000445181 RNF187Q5TA31 235 aaPredicted RBP23.41■■□□□ 1.34
C9orf3-207ENST00000445181 IGF2-ASQ6U949 168 aa23.41■■□□□ 1.34
C9orf3-207ENST00000445181 TMPRSS9Q7Z410 1059 aa23.41■■□□□ 1.34
C9orf3-207ENST00000445181 SPACA3Q8IXA5 215 aa23.41■■□□□ 1.34
C9orf3-207ENST00000445181 BBOF1Q8ND07 529 aa23.41■■□□□ 1.34
C9orf3-207ENST00000445181 SPDYE1Q8NFV5 336 aaPredicted RBP23.41■■□□□ 1.34
C9orf3-207ENST00000445181 NCSTNQ92542 709 aa23.41■■□□□ 1.34
C9orf3-207ENST00000445181 NAF1Q96HR8 494 aaKnown RBP23.41■■□□□ 1.34
C9orf3-207ENST00000445181 RMDN2Q96LZ7 410 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms