RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 MUSKO15146 869 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 TREHO43280 583 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 KATNA1O75449 491 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 ANXA6P08133 673 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 LTA4HP09960 611 aaKnown RBP7.43□□□□□ -1.22
HDAC9-214ENST00000441542 HSD17B1P14061 328 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 MSH3P20585 1137 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 CD9P21926 228 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 C21orf33P30042 268 aaPredicted RBP7.43□□□□□ -1.22
HDAC9-214ENST00000441542 HSD17B7P56937 341 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 CDH17Q12864 832 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 PRSS36Q5K4E3 855 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 LAIR1Q6GTX8 287 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 CES5AQ6NT32 575 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 PRMT9Q6P2P2 845 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 ABHD15Q6UXT9 468 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 ZNF517Q6ZMY9 492 aaPredicted RBP7.43□□□□□ -1.22
HDAC9-214ENST00000441542 GCNT7Q6ZNI0 430 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 B3GNT8Q7Z7M8 397 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 VSIG10LQ86VR7 867 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 AMIGO1Q86WK6 493 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 FAM126BQ8IXS8 530 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 DCP1BQ8IZD4 617 aaKnown RBP7.43□□□□□ -1.22
HDAC9-214ENST00000441542 GTF2H4Q92759 462 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 TSEN34Q9BSV6 310 aaKnown RBP7.43□□□□□ -1.22
HDAC9-214ENST00000441542 COPS4Q9BT78 406 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 LRRC4Q9HBW1 653 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 POLR3BQ9NW08 1133 aaPredicted RBP7.43□□□□□ -1.22
HDAC9-214ENST00000441542 PRKAB1Q9Y478 270 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 ZNF451Q9Y4E5 1061 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 THSD7BQ9C0I4 1608 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 PTPRFP10586 1907 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 UBA6A0AVT1 1052 aaPredicted RBP7.43□□□□□ -1.22
HDAC9-214ENST00000441542 TRIM64BA6NI03 449 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 RGS13O14921 159 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 CDK14O94921 469 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 PRSS23O95084 383 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 NDST3O95803 873 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 GRK3P35626 688 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 ARL2P36404 184 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 LIPAP38571 399 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 PSMD8P48556 350 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 ZNF267Q14586 743 aaPredicted RBP7.43□□□□□ -1.22
HDAC9-214ENST00000441542 GTDC1Q4AE62 458 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 UNC50Q53HI1 259 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 ZMAT1Q5H9K5 638 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 TECRLQ5HYJ1 363 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 MPZL3Q6UWV2 235 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 HFE2Q6ZVN8 426 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 CLYBLQ8N0X4 340 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 CDYL2Q8N8U2 506 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 IL17RDQ8NFM7 739 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 LPAR1Q92633 364 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.43□□□□□ -1.22
HDAC9-214ENST00000441542 SLC47A1Q96FL8 570 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 DUS3LQ96G46 650 aaKnown RBP7.43□□□□□ -1.22
HDAC9-214ENST00000441542 GFM1Q96RP9 751 aaKnown RBP7.43□□□□□ -1.22
HDAC9-214ENST00000441542 NELL2Q99435 816 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 TAS2R16Q9NYV7 291 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 DNMT3LQ9UJW3 386 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 PCDHGB6Q9Y5F9 930 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 PCDHA9Q9Y5H5 950 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 CDK5RAP2Q96SN8 1893 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 RGS10O43665 173 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 DFNA5O60443 496 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 LILRB3O75022 631 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 TP53P04637 393 aaPredicted RBP7.42□□□□□ -1.22
HDAC9-214ENST00000441542 CCNYL3P0C7X3 344 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 ICAM3P32942 547 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 OR3A3P47888 321 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 TGM4P49221 684 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 STAT5BP51692 787 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 KPNA2P52292 529 aaKnown RBP7.42□□□□□ -1.22
HDAC9-214ENST00000441542 MAXP61244 160 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 MXD1Q05195 221 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 TMEM132DQ14C87 1099 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 UGP2Q16851 508 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 LCLAT1Q6UWP7 414 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 LRRC8DQ7L1W4 858 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 NIPA1Q7RTP0 329 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 HIPK1Q86Z02 1210 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 CAMKK1Q8N5S9 505 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 ATG16L2Q8NAA4 619 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 PPHLN1Q8NEY8 458 aaKnown RBP7.42□□□□□ -1.22
HDAC9-214ENST00000441542 SLC2A14Q8TDB8 520 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 AKT1S1Q96B36 256 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 UCK2Q9BZX2 261 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 TUBB1Q9H4B7 451 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 SP140LQ9H930 580 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 SARS2Q9NP81 518 aaKnown RBP7.42□□□□□ -1.22
HDAC9-214ENST00000441542 FBXL12Q9NXK8 326 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 KIF17Q9P2E2 1029 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 FAM50BQ9Y247 325 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 A0A0G2JMP0 313 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 ASPDHA6ND91 283 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 SNTNA6NMZ2 147 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 EVPLLA8MZ36 301 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 UPK1AO00322 258 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 SCO2O43819 266 aa7.42□□□□□ -1.22
HDAC9-214ENST00000441542 SLC22A3O75751 556 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms