RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 OR4K17Q8NGC6 315 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 FAR1Q8WVX9 515 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 NTAN1Q96AB6 310 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 TGM7Q96PF1 710 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 UGT2B17O75795 530 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 AQP1P29972 269 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 PREPP48147 710 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 DSG1Q02413 1049 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 HEPACAMQ14CZ8 416 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 FBXO43Q4G163 708 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 PRAMEF14Q5SWL7 426 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 PRAMEF13Q5VWM6 474 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 SLC36A4Q6YBV0 504 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 PRR11Q96HE9 360 aaPredicted RBP11.92□□□□□ -0.5
NEK1-201ENST00000439128 MIPEPQ99797 713 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 HRASLS2Q9NWW9 162 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 TRAF6Q9Y4K3 522 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 TULP2O00295 520 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 WWP2O00308 870 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 PDE5AO76074 875 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 IDO1P14902 403 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 DEFA1P59665 94 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 DEFA3P59666 94 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 LMAN2Q12907 356 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 LRRC26Q2I0M4 334 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 RABEPKQ7Z6M1 372 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 ZNF598Q86UK7 904 aaKnown RBP11.92□□□□□ -0.5
NEK1-201ENST00000439128 DNAJC9Q8WXX5 260 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 DCBLD2Q96PD2 775 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 ADAP2Q9NPF8 381 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 FZD3Q9NPG1 666 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 ACSS2Q9NR19 701 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 RFXAPO00287 272 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 DCLK1O15075 740 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 TLX3O43711 291 aaPredicted RBP11.92□□□□□ -0.5
NEK1-201ENST00000439128 SLC22A3O75751 556 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 SEMA4FO95754 770 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 AHCYP23526 432 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 ENPEPQ07075 957 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 ARMC4Q5T2S8 1044 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 USP53Q70EK8 1073 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 CREG2Q8IUH2 290 aa11.92□□□□□ -0.5
NEK1-201ENST00000439128 TFGQ92734 400 aaPredicted RBP11.92□□□□□ -0.5
NEK1-201ENST00000439128 SUV39H1O43463 412 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 VEGFDO43915 354 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 IPO13O94829 963 aaKnown RBP11.91□□□□□ -0.5
NEK1-201ENST00000439128 STK19P49842 368 aaPredicted RBP11.91□□□□□ -0.5
NEK1-201ENST00000439128 INAQ16352 499 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 ARSJQ5FYB0 599 aaPredicted RBP11.91□□□□□ -0.5
NEK1-201ENST00000439128 TTC23Q5W5X9 447 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 LYSMD4Q5XG99 296 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 TDHQ8IZJ6 230 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 PIWIL2Q8TC59 973 aaKnown RBP11.91□□□□□ -0.5
NEK1-201ENST00000439128 OR2M4Q96R27 311 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 FUCA2Q9BTY2 467 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 METTL7AQ9H8H3 244 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 NOD2Q9HC29 1040 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 H0YGN5 161 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 CLUP10909 449 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 HNF1BP35680 557 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 ZNF730Q6ZMV8 503 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 TRIM74Q86UV6 250 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 TCF12Q99081 682 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 SERINC1Q9NRX5 453 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 BACE2Q9Y5Z0 518 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 FAM208AQ9UK61 1670 aaKnown RBP11.91□□□□□ -0.5
NEK1-201ENST00000439128 NOL4O94818 638 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 ASGR2P07307 311 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 SLC7A2P52569 658 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 RGS8P57771 180 aaPredicted RBP11.91□□□□□ -0.5
NEK1-201ENST00000439128 RPS15P62841 145 aaKnown RBP11.91□□□□□ -0.5
NEK1-201ENST00000439128 SLC1A5Q15758 541 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 NUP54Q7Z3B4 507 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 IZUMO1Q8IYV9 350 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 SAMD14Q8IZD0 417 aaPredicted RBP11.91□□□□□ -0.5
NEK1-201ENST00000439128 SETD9Q8NE22 299 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 ART4Q93070 314 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 PAAF1Q9BRP4 392 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 TTC34A8MYJ7 566 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 PIRO00625 290 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 MAGEB3O15480 346 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 ERI3O43414 337 aaKnown RBP11.91□□□□□ -0.5
NEK1-201ENST00000439128 KIR3DL1P43629 444 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 ZBTB6Q15916 424 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 ZNF805Q5CZA5 627 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 HGSNATQ68CP4 663 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 UBE2J2Q8N2K1 259 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 PCDH19Q8TAB3 1148 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 FAM81AQ8TBF8 368 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 SORCS1Q8WY21 1168 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 YIPF3Q9GZM5 350 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 HDHD2Q9H0R4 259 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 SEMA6AQ9H2E6 1030 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 ZDHHC7Q9NXF8 308 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 DKKL1Q9UK85 242 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 CCDC162PA2VCL2 907 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 C2P06681 752 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 OGNP20774 298 aaKnown RBP11.91□□□□□ -0.5
NEK1-201ENST00000439128 ITGA3P26006 1051 aa11.91□□□□□ -0.5
NEK1-201ENST00000439128 NCBP2P52298 156 aaKnown RBP eCLIP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms