RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 DCNP07585 359 aaKnown RBP2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 ETFAP13804 333 aa2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 ITGA2P17301 1181 aa2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 CYP2B6P20813 491 aa2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 CLDN2P57739 230 aa2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 KRT83P78385 493 aa2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 CSTF1Q05048 431 aaKnown RBP2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 CHRNDQ07001 517 aa2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 TRIM14Q14142 442 aa2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 SYCP2LQ5T4T6 812 aa2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 ARHGAP17Q68EM7 881 aa2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 TRNP1Q6NT89 227 aa2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 MTSS1LQ765P7 747 aa2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 NOXA1Q86UR1 476 aa2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 FAM160B2Q86V87 743 aa2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 DSELQ8IZU8 1212 aa2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 CEP70Q8NHQ1 597 aa2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 ZNF583Q96ND8 569 aa2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 ZNF570Q96NI8 536 aa2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 CD180Q99467 661 aa2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 PAGR1Q9BTK6 254 aa2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 LRRC1Q9BTT6 524 aa2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 ZNF700Q9H0M5 742 aa2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 MROH8Q9H579 483 aa2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 DDX4Q9NQI0 724 aaKnown RBP2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 RCOR1Q9UKL0 485 aa2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 PADI1Q9ULC6 663 aa2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 CARD8Q9Y2G2 431 aa2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 GREB1LQ9C091 1923 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 MUC22E2RYF6 1773 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P18-201ENST00000438801 SDK1Q7Z5N4 2213 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 SDK2Q58EX2 2172 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 B9A039 149 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 PEX12O00623 359 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 DVL1O14640 695 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 EXTL3O43909 919 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 G6PDP11413 515 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 S1PR1P21453 382 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 GNL1P36915 607 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 EIF2S3P41091 472 aaKnown RBP2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 CLCNKAP51800 687 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 DVL1P1P54792 670 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 NAA25Q14CX7 972 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 PDSS1Q5T2R2 415 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 STXBP5Q5T5C0 1151 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 LRRC8EQ6NSJ5 796 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 ANKRD54Q6NXT1 300 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 SLC36A4Q6YBV0 504 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 ZNF852Q6ZMS4 543 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 ANKRD23Q86SG2 305 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 RNF113BQ8IZP6 322 aaKnown RBP2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 C1orf87Q8N0U7 546 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 ZBTB44Q8NCP5 570 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 MCUQ8NE86 351 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 OR10V1Q8NGI7 309 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 DUSP19Q8WTR2 217 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 TRAPPC12Q8WVT3 735 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 RILPL2Q969X0 211 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 ANKRD9Q96BM1 317 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 LGALS12Q96DT0 336 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 TGS1Q96RS0 853 aaKnown RBP2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 SIN3AQ96ST3 1273 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 FAM167BQ9BTA0 163 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 NUF2Q9BZD4 464 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 FKRPQ9H9S5 495 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 VEZTQ9HBM0 779 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 NOD2Q9HC29 1040 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 RASSF1Q9NS23 344 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 BABAM1Q9NWV8 329 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 HCFC1R1Q9NWW0 138 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 ALKBH4Q9NXW9 302 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 FEM1BQ9UK73 627 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 TBX21Q9UL17 535 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 FAF1Q9UNN5 650 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 AMDHD2Q9Y303 409 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 TENM2Q9NT68 2774 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 NCAPD2Q15021 1401 aa2.76□□□□□ -1.97
HMGB1P18-201ENST00000438801 ROCK1Q13464 1354 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 RTL9Q8NET4 1388 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 ABCC12Q96J65 1359 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 HERC2O95714 4834 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 VWA3AA6NCI4 1184 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 GOLGA6L9A6NEM1 432 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 F5H6K3 240 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 H0Y626 953 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 SPRY1O43609 319 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 ZNF500O60304 480 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 TRIM16O95361 564 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 TUBBP07437 444 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 MMP2P08253 660 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 PAX1P15863 534 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 EDN2P20800 178 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 AGAP20933 346 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 TUBB4BP68371 445 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 TBL3Q12788 808 aaKnown RBP2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 VGLL4Q14135 290 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 POSTNQ15063 836 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 KRT24Q2M2I5 525 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 ADCK5Q3MIX3 580 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 ZNF876PQ49A33 203 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms