RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 HHEXQ03014 270 aa15.82■□□□□ 0.12
SNRPB-202ENST00000438552 ILKQ13418 452 aa15.82■□□□□ 0.12
SNRPB-202ENST00000438552 FRG1Q14331 258 aaKnown RBP15.82■□□□□ 0.12
SNRPB-202ENST00000438552 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.82■□□□□ 0.12
SNRPB-202ENST00000438552 DUS1LQ6P1R4 473 aaKnown RBP15.82■□□□□ 0.12
SNRPB-202ENST00000438552 ABRAXAS1Q6UWZ7 409 aa15.82■□□□□ 0.12
SNRPB-202ENST00000438552 ZNF438Q7Z4V0 828 aa15.82■□□□□ 0.12
SNRPB-202ENST00000438552 SLC9B2Q86UD5 537 aa15.82■□□□□ 0.12
SNRPB-202ENST00000438552 CNTN4Q8IWV2 1026 aa15.82■□□□□ 0.12
SNRPB-202ENST00000438552 TRIM48Q8IWZ4 208 aa15.82■□□□□ 0.12
SNRPB-202ENST00000438552 Q8N9G6 341 aaPredicted RBP15.82■□□□□ 0.12
SNRPB-202ENST00000438552 C2CD4AQ8NCU7 369 aaPredicted RBP15.82■□□□□ 0.12
SNRPB-202ENST00000438552 OR6C4Q8NGE1 309 aa15.82■□□□□ 0.12
SNRPB-202ENST00000438552 FAM136AQ96C01 138 aa15.82■□□□□ 0.12
SNRPB-202ENST00000438552 TSSK1BQ9BXA7 367 aa15.82■□□□□ 0.12
SNRPB-202ENST00000438552 FAM129AQ9BZQ8 928 aa15.82■□□□□ 0.12
SNRPB-202ENST00000438552 ZNF624Q9P2J8 865 aaPredicted RBP15.82■□□□□ 0.12
SNRPB-202ENST00000438552 CPNE7Q9UBL6 633 aa15.82■□□□□ 0.12
SNRPB-202ENST00000438552 MTRF1LQ9UGC7 380 aaKnown RBP15.82■□□□□ 0.12
SNRPB-202ENST00000438552 ACSL5Q9ULC5 683 aa15.82■□□□□ 0.12
SNRPB-202ENST00000438552 VPS9D1Q9Y2B5 631 aa15.82■□□□□ 0.12
SNRPB-202ENST00000438552 PCDHB1Q9Y5F3 818 aa15.82■□□□□ 0.12
SNRPB-202ENST00000438552 CFAP20Q9Y6A4 193 aaKnown RBP15.82■□□□□ 0.12
SNRPB-202ENST00000438552 PRAMEF33A0A0G2JMD5 474 aa15.81■□□□□ 0.12
SNRPB-202ENST00000438552 OR5K4A6NMS3 321 aa15.81■□□□□ 0.12
SNRPB-202ENST00000438552 LIN7AO14910 233 aaPredicted RBP15.81■□□□□ 0.12
SNRPB-202ENST00000438552 OPA1O60313 960 aa15.81■□□□□ 0.12
SNRPB-202ENST00000438552 ESR1P03372 595 aa15.81■□□□□ 0.12
SNRPB-202ENST00000438552 PDHA2P29803 388 aa15.81■□□□□ 0.12
SNRPB-202ENST00000438552 CCR7P32248 378 aa15.81■□□□□ 0.12
SNRPB-202ENST00000438552 SLC19A1P41440 591 aa15.81■□□□□ 0.12
SNRPB-202ENST00000438552 FASLGP48023 281 aa15.81■□□□□ 0.12
SNRPB-202ENST00000438552 GPX6P59796 221 aa15.81■□□□□ 0.12
SNRPB-202ENST00000438552 MGAT5Q09328 741 aa15.81■□□□□ 0.12
SNRPB-202ENST00000438552 FOXC1Q12948 553 aa15.81■□□□□ 0.12
SNRPB-202ENST00000438552 RPE65Q16518 533 aa15.81■□□□□ 0.12
SNRPB-202ENST00000438552 ZNF549Q6P9A3 640 aa15.81■□□□□ 0.12
SNRPB-202ENST00000438552 CNSTQ6PJW8 725 aa15.81■□□□□ 0.12
SNRPB-202ENST00000438552 ERMP1Q7Z2K6 904 aa15.81■□□□□ 0.12
SNRPB-202ENST00000438552 SPRED1Q7Z699 444 aa15.81■□□□□ 0.12
SNRPB-202ENST00000438552 PALM2Q8IXS6 379 aa15.81■□□□□ 0.12
SNRPB-202ENST00000438552 GABPB2Q8TAK5 448 aaPredicted RBP15.81■□□□□ 0.12
SNRPB-202ENST00000438552 ADAMTS14Q8WXS8 1223 aa15.81■□□□□ 0.12
SNRPB-202ENST00000438552 CXorf40BQ96DE9 158 aa15.81■□□□□ 0.12
SNRPB-202ENST00000438552 C12orf66Q96MD2 445 aa15.81■□□□□ 0.12
SNRPB-202ENST00000438552 FMO2Q99518 471 aa15.81■□□□□ 0.12
SNRPB-202ENST00000438552 OR52A5Q9H2C5 316 aa15.81■□□□□ 0.12
SNRPB-202ENST00000438552 STN1Q9H668 368 aaKnown RBP15.81■□□□□ 0.12
SNRPB-202ENST00000438552 SARS2Q9NP81 518 aaKnown RBP15.81■□□□□ 0.12
SNRPB-202ENST00000438552 IMP3Q9NV31 184 aaKnown RBP15.81■□□□□ 0.12
SNRPB-202ENST00000438552 ZFATQ9P243 1243 aa15.81■□□□□ 0.12
SNRPB-202ENST00000438552 SLC5A10A0PJK1 596 aa15.8■□□□□ 0.12
SNRPB-202ENST00000438552 PIAS1O75925 651 aa15.8■□□□□ 0.12
SNRPB-202ENST00000438552 HAUS5O94927 633 aa15.8■□□□□ 0.12
SNRPB-202ENST00000438552 TOP3BO95985 862 aaKnown RBP15.8■□□□□ 0.12
SNRPB-202ENST00000438552 RPLP0P05388 317 aaKnown RBP15.8■□□□□ 0.12
SNRPB-202ENST00000438552 MTHFD1P11586 935 aaKnown RBP15.8■□□□□ 0.12
SNRPB-202ENST00000438552 PKMP14618 531 aaKnown RBP15.8■□□□□ 0.12
SNRPB-202ENST00000438552 AOAHP28039 575 aa15.8■□□□□ 0.12
SNRPB-202ENST00000438552 ADARP55265 1226 aaKnown RBP15.8■□□□□ 0.12
SNRPB-202ENST00000438552 CCL7P80098 99 aa15.8■□□□□ 0.12
SNRPB-202ENST00000438552 INSM1Q01101 510 aaPredicted RBP15.8■□□□□ 0.12
SNRPB-202ENST00000438552 CUL1Q13616 776 aa15.8■□□□□ 0.12
SNRPB-202ENST00000438552 NR1D2Q14995 579 aa15.8■□□□□ 0.12
SNRPB-202ENST00000438552 UBAP2Q5T6F2 1119 aaKnown RBP15.8■□□□□ 0.12
SNRPB-202ENST00000438552 TEDDM1Q5T9Z0 273 aa15.8■□□□□ 0.12
SNRPB-202ENST00000438552 RAB44Q7Z6P3 723 aaPredicted RBP15.8■□□□□ 0.12
SNRPB-202ENST00000438552 PDZD3Q86UT5 571 aa15.8■□□□□ 0.12
SNRPB-202ENST00000438552 SPNS2Q8IVW8 549 aa15.8■□□□□ 0.12
SNRPB-202ENST00000438552 CHCHD4Q8N4Q1 142 aa15.8■□□□□ 0.12
SNRPB-202ENST00000438552 PANX3Q96QZ0 392 aa15.8■□□□□ 0.12
SNRPB-202ENST00000438552 INSM2Q96T92 566 aaPredicted RBP15.8■□□□□ 0.12
SNRPB-202ENST00000438552 POT1Q9NUX5 634 aa15.8■□□□□ 0.12
SNRPB-202ENST00000438552 MOCS1Q9NZB8 636 aa15.8■□□□□ 0.12
SNRPB-202ENST00000438552 NFU1Q9UMS0 254 aa15.8■□□□□ 0.12
SNRPB-202ENST00000438552 PSAT1Q9Y617 370 aa15.8■□□□□ 0.12
SNRPB-202ENST00000438552 TCRBV9S1A1TA0A576 114 aa15.79■□□□□ 0.12
SNRPB-202ENST00000438552 H3BMM5 538 aa15.79■□□□□ 0.12
SNRPB-202ENST00000438552 HYAL3O43820 417 aaPredicted RBP15.79■□□□□ 0.12
SNRPB-202ENST00000438552 VIPP01282 170 aa15.79■□□□□ 0.12
SNRPB-202ENST00000438552 PNLIPP16233 465 aa15.79■□□□□ 0.12
SNRPB-202ENST00000438552 XRCC1P18887 633 aaPredicted RBP15.79■□□□□ 0.12
SNRPB-202ENST00000438552 GABRB3P28472 473 aa15.79■□□□□ 0.12
SNRPB-202ENST00000438552 ALDH4A1P30038 563 aa15.79■□□□□ 0.12
SNRPB-202ENST00000438552 LEPRP48357 1165 aaKnown RBP15.79■□□□□ 0.12
SNRPB-202ENST00000438552 OR1D5P58170 312 aa15.79■□□□□ 0.12
SNRPB-202ENST00000438552 HSPA14Q0VDF9 509 aa15.79■□□□□ 0.12
SNRPB-202ENST00000438552 RPA4Q13156 261 aa15.79■□□□□ 0.12
SNRPB-202ENST00000438552 TMED2Q15363 201 aa15.79■□□□□ 0.12
SNRPB-202ENST00000438552 HES3Q5TGS1 186 aa15.79■□□□□ 0.12
SNRPB-202ENST00000438552 CAPRIN2Q6IMN6 1127 aaKnown RBP15.79■□□□□ 0.12
SNRPB-202ENST00000438552 ZNF449Q6P9G9 518 aa15.79■□□□□ 0.12
SNRPB-202ENST00000438552 KIAA0408Q6ZU52 694 aa15.79■□□□□ 0.12
SNRPB-202ENST00000438552 VRK3Q8IV63 474 aa15.79■□□□□ 0.12
SNRPB-202ENST00000438552 IFT20Q8IY31 132 aa15.79■□□□□ 0.12
SNRPB-202ENST00000438552 GSPT2Q8IYD1 628 aaKnown RBP15.79■□□□□ 0.12
SNRPB-202ENST00000438552 AVL9Q8NBF6 648 aa15.79■□□□□ 0.12
SNRPB-202ENST00000438552 TMEM159Q96B96 161 aa15.79■□□□□ 0.12
SNRPB-202ENST00000438552 NDNQ99608 321 aa15.79■□□□□ 0.12
SNRPB-202ENST00000438552 ABCG4Q9H172 646 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms