RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 PHF19Q5T6S3 580 aa18.49■□□□□ 0.55
RPUSD3-207ENST00000433555 ARMC3Q5W041 872 aa18.49■□□□□ 0.55
RPUSD3-207ENST00000433555 CAPRIN2Q6IMN6 1127 aaKnown RBP18.49■□□□□ 0.55
RPUSD3-207ENST00000433555 UNC5BQ8IZJ1 945 aa18.49■□□□□ 0.55
RPUSD3-207ENST00000433555 AVL9Q8NBF6 648 aa18.49■□□□□ 0.55
RPUSD3-207ENST00000433555 RCBTB1Q8NDN9 531 aa18.49■□□□□ 0.55
RPUSD3-207ENST00000433555 OR10G6Q8NH81 332 aa18.49■□□□□ 0.55
RPUSD3-207ENST00000433555 RSC1A1Q92681 617 aa18.49■□□□□ 0.55
RPUSD3-207ENST00000433555 SH3KBP1Q96B97 665 aa18.49■□□□□ 0.55
RPUSD3-207ENST00000433555 STAMBPL1Q96FJ0 436 aa18.49■□□□□ 0.55
RPUSD3-207ENST00000433555 SNF8Q96H20 258 aa18.49■□□□□ 0.55
RPUSD3-207ENST00000433555 CCDC86Q9H6F5 360 aaKnown RBP18.49■□□□□ 0.55
RPUSD3-207ENST00000433555 ACSL5Q9ULC5 683 aa18.49■□□□□ 0.55
RPUSD3-207ENST00000433555 RPS6KL1Q9Y6S9 549 aa18.49■□□□□ 0.55
RPUSD3-207ENST00000433555 APC2O95996 2303 aa18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 CCDC187A0A096LP49 1063 aa18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 KLHL33A6NCF5 533 aa18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 TMEM8BA6NDV4 472 aa18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 TLX3O43711 291 aaPredicted RBP18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 THRAP10827 490 aa18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 TTPAP49638 278 aa18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 GFERP55789 205 aa18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 SQSTM1Q13501 440 aa18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 BOP1Q14137 746 aaKnown RBP18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 MORF4L2Q15014 288 aa18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 BRD3Q15059 726 aa18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 ST3GAL2Q16842 350 aa18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 ZNF789Q5FWF6 425 aa18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 AARS2Q5JTZ9 985 aaKnown RBP18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 CENPUQ71F23 418 aa18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 PCGF5Q86SE9 256 aa18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 PIM3Q86V86 326 aa18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 ELMO1Q92556 727 aa18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 LPGAT1Q92604 370 aa18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 TMEM74Q96NL1 305 aa18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 NRTNQ99748 197 aa18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 ZMYND15Q9H091 742 aa18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 VPS37BQ9H9H4 285 aa18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 POLR1BQ9H9Y6 1135 aa18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 ASCL3Q9NQ33 180 aa18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 DKK4Q9UBT3 224 aa18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 ANAPC5Q9UJX4 755 aa18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 ZMIZ1Q9ULJ6 1067 aa18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 SNX24Q9Y343 169 aa18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 AK5Q9Y6K8 562 aa18.48■□□□□ 0.55
RPUSD3-207ENST00000433555 SLC5A10A0PJK1 596 aa18.47■□□□□ 0.55
RPUSD3-207ENST00000433555 EFCAB8A8MWE9 144 aa18.47■□□□□ 0.55
RPUSD3-207ENST00000433555 PRMT5O14744 637 aaPredicted RBP18.47■□□□□ 0.55
RPUSD3-207ENST00000433555 USP1O94782 785 aa18.47■□□□□ 0.55
RPUSD3-207ENST00000433555 FTH1P02794 183 aa18.47■□□□□ 0.55
RPUSD3-207ENST00000433555 OR56A5P0C7T3 313 aa18.47■□□□□ 0.55
RPUSD3-207ENST00000433555 TYRP1P17643 537 aa18.47■□□□□ 0.55
RPUSD3-207ENST00000433555 CCR7P32248 378 aa18.47■□□□□ 0.55
RPUSD3-207ENST00000433555 ETV5P41161 510 aa18.47■□□□□ 0.55
RPUSD3-207ENST00000433555 LIMK2P53671 638 aa18.47■□□□□ 0.55
RPUSD3-207ENST00000433555 PPP1CAP62136 330 aa18.47■□□□□ 0.55
RPUSD3-207ENST00000433555 CLPPQ16740 277 aaPredicted RBP18.47■□□□□ 0.55
RPUSD3-207ENST00000433555 BBS9Q3SYG4 887 aa18.47■□□□□ 0.55
RPUSD3-207ENST00000433555 HP1BP3Q5SSJ5 553 aaPredicted RBP18.47■□□□□ 0.55
RPUSD3-207ENST00000433555 FOXR1Q6PIV2 292 aa18.47■□□□□ 0.55
RPUSD3-207ENST00000433555 PROSER1Q86XN7 944 aa18.47■□□□□ 0.55
RPUSD3-207ENST00000433555 SPNS2Q8IVW8 549 aa18.47■□□□□ 0.55
RPUSD3-207ENST00000433555 DENND6AQ8IWF6 608 aa18.47■□□□□ 0.55
RPUSD3-207ENST00000433555 OR4D9Q8NGE8 314 aa18.47■□□□□ 0.55
RPUSD3-207ENST00000433555 AHCYL2Q96HN2 611 aaKnown RBP18.47■□□□□ 0.55
RPUSD3-207ENST00000433555 DPH5Q9H2P9 285 aa18.47■□□□□ 0.55
RPUSD3-207ENST00000433555 CDC23Q9UJX2 597 aa18.47■□□□□ 0.55
RPUSD3-207ENST00000433555 LOXL2Q9Y4K0 774 aa18.47■□□□□ 0.55
RPUSD3-207ENST00000433555 MN1Q10571 1320 aaPredicted RBP18.47■□□□□ 0.55
RPUSD3-207ENST00000433555 UBA6A0AVT1 1052 aaPredicted RBP18.46■□□□□ 0.55
RPUSD3-207ENST00000433555 QSOX1O00391 747 aa18.46■□□□□ 0.55
RPUSD3-207ENST00000433555 PGAM1P18669 254 aa18.46■□□□□ 0.55
RPUSD3-207ENST00000433555 PAMP19021 973 aa18.46■□□□□ 0.55
RPUSD3-207ENST00000433555 ITIH1P19827 911 aa18.46■□□□□ 0.55
RPUSD3-207ENST00000433555 OGNP20774 298 aaKnown RBP18.46■□□□□ 0.55
RPUSD3-207ENST00000433555 RPS3P23396 243 aaKnown RBP eCLIP18.46■□□□□ 0.558e-7■■■■■ 45.5
RPUSD3-207ENST00000433555 CAPZBP47756 277 aa18.46■□□□□ 0.55
RPUSD3-207ENST00000433555 LSSP48449 732 aa18.46■□□□□ 0.55
RPUSD3-207ENST00000433555 PPM1FP49593 454 aaPredicted RBP18.46■□□□□ 0.55
RPUSD3-207ENST00000433555 CSE1LP55060 971 aaKnown RBP18.46■□□□□ 0.55
RPUSD3-207ENST00000433555 EIF3BP55884 814 aaKnown RBP18.46■□□□□ 0.55
RPUSD3-207ENST00000433555 CRYMQ14894 314 aa18.46■□□□□ 0.55
RPUSD3-207ENST00000433555 ZNF470Q6ECI4 717 aa18.46■□□□□ 0.55
RPUSD3-207ENST00000433555 TMEM71Q6P5X7 295 aa18.46■□□□□ 0.55
RPUSD3-207ENST00000433555 PDZD3Q86UT5 571 aa18.46■□□□□ 0.55
RPUSD3-207ENST00000433555 CILP2Q8IUL8 1156 aa18.46■□□□□ 0.55
RPUSD3-207ENST00000433555 VRK3Q8IV63 474 aa18.46■□□□□ 0.55
RPUSD3-207ENST00000433555 WDR36Q8NI36 951 aaKnown RBP18.46■□□□□ 0.55
RPUSD3-207ENST00000433555 NCSTNQ92542 709 aa18.46■□□□□ 0.55
RPUSD3-207ENST00000433555 ZNF592Q92610 1267 aa18.46■□□□□ 0.55
RPUSD3-207ENST00000433555 GRAMD1AQ96CP6 724 aa18.46■□□□□ 0.55
RPUSD3-207ENST00000433555 BIRC8Q96P09 236 aa18.46■□□□□ 0.55
RPUSD3-207ENST00000433555 TTC1Q99614 292 aa18.46■□□□□ 0.55
RPUSD3-207ENST00000433555 STRADBQ9C0K7 418 aa18.46■□□□□ 0.55
RPUSD3-207ENST00000433555 GRHL1Q9NZI5 618 aa18.46■□□□□ 0.55
RPUSD3-207ENST00000433555 CHMP2BQ9UQN3 213 aa18.46■□□□□ 0.55
RPUSD3-207ENST00000433555 CDYLQ9Y232 598 aa18.46■□□□□ 0.55
RPUSD3-207ENST00000433555 FAM187AA6NFU0 413 aa18.45■□□□□ 0.54
RPUSD3-207ENST00000433555 BHMG1C9JSJ3 638 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms