RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 RNF224P0DH78 156 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 FGF5P12034 268 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 CDH1P12830 882 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 MMP9P14780 707 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 IL11P20809 199 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 HRH2P25021 359 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 CORO1AP31146 461 aaKnown RBP2.05□□□□□ -2.08
CDC40-204ENST00000431461 VEGFCP49767 419 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 HSD17B4P51659 736 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 CLDN20P56880 219 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 TMF1P82094 1093 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 PRKCZQ05513 592 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 HSPB3Q12988 150 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 ZBTB17Q13105 803 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 GRAPQ13588 217 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 MELKQ14680 651 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 KIR2DS3Q14952 304 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 KIR2DS5Q14953 304 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 CBWD6Q4V339 395 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 SETMARQ53H47 684 aaPredicted RBP2.05□□□□□ -2.08
CDC40-204ENST00000431461 RAB6CQ53S08 254 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 FAM133BQ5BKY9 247 aaKnown RBP2.05□□□□□ -2.08
CDC40-204ENST00000431461 CBWD3Q5JTY5 395 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 ARMC4Q5T2S8 1044 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 BSPRYQ5W0U4 402 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 CST9LP1Q5W188 147 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 OR7E24Q6IFN5 339 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 ADAM5Q6NVV9 412 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 KLC3Q6P597 504 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 GFRALQ6UXV0 394 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 MEX3BQ6ZN04 569 aaKnown RBP2.05□□□□□ -2.08
CDC40-204ENST00000431461 Q75L30 129 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 CHST3Q7LGC8 479 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 CCDC186Q7Z3E2 898 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 TMEM219Q86XT9 240 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 GALNT13Q8IUC8 556 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 RASGEF1CQ8N431 466 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 POC1AQ8NBT0 407 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 OR2AK2Q8NG84 335 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 OR5R1Q8NH85 324 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 BBS10Q8TAM1 723 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 SLC22A18Q96BI1 424 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 SPACA9Q96E40 222 aaPredicted RBP2.05□□□□□ -2.08
CDC40-204ENST00000431461 SGK494Q96LW2 274 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 TTC14Q96N46 770 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 UHRF2Q96PU4 802 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 NODALQ96S42 347 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 GAD1Q99259 594 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 DDOQ99489 341 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 HGH1Q9BTY7 390 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 RAB6CQ9H0N0 254 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 ANKZF1Q9H8Y5 726 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 ERVMER34-1Q9H9K5 563 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 WSB2Q9NYS7 404 aaPredicted RBP2.05□□□□□ -2.08
CDC40-204ENST00000431461 TAS2R14Q9NYV8 317 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 GDE1Q9NZC3 331 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 LARSQ9P2J5 1176 aaKnown RBP2.05□□□□□ -2.08
CDC40-204ENST00000431461 ANAPC2Q9UJX6 822 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 PLAGL1Q9UM63 463 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 TCF19Q9Y242 345 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 FAM169AQ9Y6X4 670 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 ASTN2O75129 1339 aaPredicted RBP2.05□□□□□ -2.08
CDC40-204ENST00000431461 SNED1Q8TER0 1413 aa2.05□□□□□ -2.08
CDC40-204ENST00000431461 LOC102723996A0A087X1L8 192 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 A0A0G2JLW4 131 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 A0A1W2PN81 502 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 hCG_1809904A0A1W2PP81 198 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 A0A1W2PPE2 198 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 A0A1W2PR64 198 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 A0A1W2PR77 199 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 SLCO1B7G3V0H7 640 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 C16orf97H3BN30 126 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 SH2B2O14492 632 aaPredicted RBP2.04□□□□□ -2.08
CDC40-204ENST00000431461 TCERG1O14776 1098 aaKnown RBP2.04□□□□□ -2.08
CDC40-204ENST00000431461 CAPN9O14815 690 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 CLIC2O15247 247 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 ENTPD3O75355 529 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 C22orf31O95567 290 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 INHBAP08476 426 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 LINGO3P0C6S8 592 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 MYBL1P10243 752 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 MYOD1P15172 320 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 PAX1P15863 534 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 PFKFB1P16118 471 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 TRIM21P19474 475 aaKnown RBP2.04□□□□□ -2.08
CDC40-204ENST00000431461 ITGB8P26012 769 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 HOXC13P31276 330 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 PCGF2P35227 344 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 ACTN2P35609 894 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 CHRNA7P36544 502 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 NOVP48745 357 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 CSE1LP55060 971 aaKnown RBP2.04□□□□□ -2.08
CDC40-204ENST00000431461 HERV-K104P61576 105 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 PHEXP78562 749 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 RELQ04864 619 aaPredicted RBP2.04□□□□□ -2.08
CDC40-204ENST00000431461 ILF3Q12906 894 aaKnown RBP eCLIP2.04□□□□□ -2.08
CDC40-204ENST00000431461 PLA2G7Q13093 441 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 DMP1Q13316 513 aaPredicted RBP2.04□□□□□ -2.08
CDC40-204ENST00000431461 MFAP5Q13361 173 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 SNTB1Q13884 538 aaKnown RBP2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms