RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 EDF1O60869 148 aaKnown RBP8.71□□□□□ -1.02
SMC6-204ENST00000428868 KERAO60938 352 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 SNNO75324 88 aaPredicted RBP8.71□□□□□ -1.02
SMC6-204ENST00000428868 SUPT3HO75486 399 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 SIX3O95343 332 aaPredicted RBP8.71□□□□□ -1.02
SMC6-204ENST00000428868 APBB3O95704 486 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 FTH1P02794 183 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 CEACAM5P06731 702 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 CHRNGP07510 517 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 RBP1P09455 135 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 MYCLP1P12525 358 aaPredicted RBP8.71□□□□□ -1.02
SMC6-204ENST00000428868 HNRNPA2B1P22626 353 aaKnown RBP8.71□□□□□ -1.02
SMC6-204ENST00000428868 DGKAP23743 735 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 TEAD1P28347 426 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 CD6P30203 668 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 SKIV2L2P42285 1042 aaKnown RBP8.71□□□□□ -1.02
SMC6-204ENST00000428868 AGTR2P50052 363 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 ATP6V0D1P61421 351 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 OCRLQ01968 901 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 GABPB1Q06547 395 aaPredicted RBP8.71□□□□□ -1.02
SMC6-204ENST00000428868 SIGLEC14Q08ET2 396 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 ILF2Q12905 390 aaKnown RBP8.71□□□□□ -1.02
SMC6-204ENST00000428868 GTF2H3Q13889 308 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 TCEA2Q15560 299 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 CCSMST1Q4G0I0 132 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 PLEKHS1Q5SXH7 462 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 UGT3A1Q6NUS8 523 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 NEK5Q6P3R8 708 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 LAYNQ6UX15 382 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 CCDC91Q7Z6B0 441 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 LSMEM2Q8N112 164 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 CNPY4Q8N129 248 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 SLC22A18ASQ8N1D0 253 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 MYO1HQ8N1T3 1032 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 PTGR2Q8N8N7 351 aaPredicted RBP8.71□□□□□ -1.02
SMC6-204ENST00000428868 RDH11Q8TC12 318 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 ZNF473Q8WTR7 871 aaKnown RBP8.71□□□□□ -1.02
SMC6-204ENST00000428868 ASB12Q8WXK4 309 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 ESAMQ96AP7 390 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 BIRC7Q96CA5 298 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 PHF21BQ96EK2 531 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 PDXPQ96GD0 296 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 PDLIM5Q96HC4 596 aaKnown RBP8.71□□□□□ -1.02
SMC6-204ENST00000428868 CCT8L2Q96SF2 557 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 SORT1Q99523 831 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 CCM2Q9BSQ5 444 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 FGF22Q9HCT0 170 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 TNFRSF12AQ9NP84 129 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 C11orf16Q9NQ32 467 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 PHPT1Q9NRX4 125 aaPredicted RBP8.71□□□□□ -1.02
SMC6-204ENST00000428868 UTP6Q9NYH9 597 aaKnown RBP8.71□□□□□ -1.02
SMC6-204ENST00000428868 NCKIPSDQ9NZQ3 722 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 CIDEBQ9UHD4 219 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 RNF112Q9ULX5 631 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 ST14Q9Y5Y6 855 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 PCDH15Q96QU1 1955 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 LAMA1P25391 3075 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 GRID2O43424 1007 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 VEGFDO43915 354 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 TRIM13O60858 407 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 POP7O75817 140 aaKnown RBP8.7□□□□□ -1.02
SMC6-204ENST00000428868 SERPINE1P05121 402 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 APOA4P06727 396 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 NEFHP12036 1026 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 TDGF1P13385 188 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 TSPAN8P19075 237 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 ATP5F1P24539 256 aaPredicted RBP8.7□□□□□ -1.02
SMC6-204ENST00000428868 MPSTP25325 297 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 BDKRB1P46663 353 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 CCR5P51681 352 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 KPNA2P52292 529 aaKnown RBP8.7□□□□□ -1.02
SMC6-204ENST00000428868 NAGLUP54802 743 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 SFSWAPQ12872 951 aaKnown RBP8.7□□□□□ -1.02
SMC6-204ENST00000428868 ABRQ12979 859 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 ZXDCQ2QGD7 858 aaPredicted RBP8.7□□□□□ -1.02
SMC6-204ENST00000428868 TTLL9Q3SXZ7 439 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 SYTL3Q4VX76 610 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 UNC50Q53HI1 259 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 LIPMQ5VYY2 423 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 KLC3Q6P597 504 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 FOXR1Q6PIV2 292 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 LRRTM4Q86VH4 590 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 RASGRP3Q8IV61 690 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 CFAP206Q8IYR0 622 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 LMNTD1Q8N9Z9 388 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 TMEM145Q8NBT3 493 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 DENND6BQ8NEG7 585 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 OR13H1Q8NG92 308 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 RFWD2Q8NHY2 731 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 RHEBL1Q8TAI7 183 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 OR1E3Q8WZA6 343 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 SNX19Q92543 992 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 EDAQ92838 391 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 SLC6A18Q96N87 628 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 NSUN5Q96P11 429 aaKnown RBP8.7□□□□□ -1.02
SMC6-204ENST00000428868 NRTNQ99748 197 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 TMEM79Q9BSE2 394 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 TSSK1BQ9BXA7 367 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 SHCBP1LQ9BZQ2 653 aa8.7□□□□□ -1.02
SMC6-204ENST00000428868 ZCCHC2Q9C0B9 1178 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms