RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 CTNNBL1Q8WYA6 563 aaPredicted RBP17.84■□□□□ 0.45
UPK3BP1-201ENST00000428678 C19orf60Q96EN9 201 aa17.84■□□□□ 0.45
UPK3BP1-201ENST00000428678 OLFM3Q96PB7 478 aa17.84■□□□□ 0.45
UPK3BP1-201ENST00000428678 INSM2Q96T92 566 aaPredicted RBP17.84■□□□□ 0.45
UPK3BP1-201ENST00000428678 TRABDQ9H4I3 376 aa17.84■□□□□ 0.45
UPK3BP1-201ENST00000428678 FAM8A1Q9UBU6 413 aa17.84■□□□□ 0.45
UPK3BP1-201ENST00000428678 SLC24A2Q9UI40 661 aa17.84■□□□□ 0.45
UPK3BP1-201ENST00000428678 LCMT1Q9UIC8 334 aa17.84■□□□□ 0.45
UPK3BP1-201ENST00000428678 BTRCQ9Y297 605 aa17.84■□□□□ 0.45
UPK3BP1-201ENST00000428678 DNMT3AQ9Y6K1 912 aaPredicted RBP17.84■□□□□ 0.45
UPK3BP1-201ENST00000428678 DIDO1Q9BTC0 2240 aaKnown RBP17.83■□□□□ 0.45
UPK3BP1-201ENST00000428678 GLYATL1P3A0A0U1RQE8 302 aa17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 SLC9B1P1A6NJY1 282 aa17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 ZNF487B1APH4 448 aa17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 BUD23O43709 281 aaKnown RBP17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 LCA5LO95447 670 aa17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 CLDN1O95832 211 aa17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 H2AFZP0C0S5 128 aa17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 POLR2CP19387 275 aaPredicted RBP17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 HLA-DPA1P20036 260 aa17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 CDH3P22223 829 aa17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 CA5AP35218 305 aa17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 TNNT3P45378 269 aaPredicted RBP17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 RRADP55042 308 aa17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 DYNLT1P63172 113 aa17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 ATP1A4Q13733 1029 aa17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 MESDQ14696 234 aa17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 NR6A1Q15406 480 aa17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 KYNUQ16719 465 aa17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 LONRF2Q1L5Z9 754 aa17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 TEX44Q53QW1 395 aa17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 H2AFVQ71UI9 128 aa17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 DET1Q7L5Y6 550 aa17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 RFX6Q8HWS3 928 aa17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 SLC25A41Q8N5S1 370 aa17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 BEND7Q8N7W2 519 aaPredicted RBP17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 GLIS1Q8NBF1 620 aa17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 TCTN2Q96GX1 697 aa17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 KIR3DX1Q9H7L2 352 aa17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 IL17CQ9P0M4 197 aa17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 FAM153AQ9UHL3 310 aa17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 ERRFI1Q9UJM3 462 aaPredicted RBP17.83■□□□□ 0.44
UPK3BP1-201ENST00000428678 C3orf70A6NLC5 250 aaPredicted RBP17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 TMEM150CB9EJG8 249 aa17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 GOLGA6L22H0YM25 854 aa17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 SLC35G4P0C7Q5 338 aa17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 ZFXP17010 805 aaPredicted RBP17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 MSH3P20585 1137 aa17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 CYP2A7P20853 494 aa17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 RORAP35398 523 aa17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 CHRNA4P43681 627 aa17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 WNT3AP56704 352 aa17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 PRKAA1Q13131 559 aa17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 ITGA9Q13797 1035 aa17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 KRT33BQ14525 404 aa17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 SIRPB2Q5JXA9 342 aa17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 FAM198BQ6UWH4 519 aa17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 GLT6D1Q7Z4J2 308 aa17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 SYTL1Q8IYJ3 562 aa17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 IQCKQ8N0W5 287 aa17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 ZBTB2Q8N680 514 aa17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 SPDYE1Q8NFV5 336 aaPredicted RBP17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 DTX3LQ8TDB6 740 aa17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 BLOC1S5Q8TDH9 187 aa17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 ZFPM2Q8WW38 1151 aa17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 SMAD5Q99717 465 aaKnown RBP17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 PACSIN1Q9BY11 444 aa17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 SLC7A5P2Q9GIP4 190 aa17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 ACTR5Q9H9F9 607 aaPredicted RBP17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 PCMTD2Q9NV79 361 aa17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 HACD3Q9P035 362 aa17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 ACSL5Q9ULC5 683 aa17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 PKP3Q9Y446 797 aa17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 POLEQ07864 2286 aa17.82■□□□□ 0.44
UPK3BP1-201ENST00000428678 MGAT4DA6NG13 374 aa17.81■□□□□ 0.44
UPK3BP1-201ENST00000428678 F5H423 210 aaPredicted RBP17.81■□□□□ 0.44
UPK3BP1-201ENST00000428678 MBD3O95983 291 aa17.81■□□□□ 0.44
UPK3BP1-201ENST00000428678 LDLRP01130 860 aa17.81■□□□□ 0.44
UPK3BP1-201ENST00000428678 KRT1P04264 644 aa17.81■□□□□ 0.44
UPK3BP1-201ENST00000428678 PTPN3P26045 913 aa17.81■□□□□ 0.44
UPK3BP1-201ENST00000428678 PREPP48147 710 aa17.81■□□□□ 0.44
UPK3BP1-201ENST00000428678 GSE1Q14687 1217 aa17.81■□□□□ 0.44
UPK3BP1-201ENST00000428678 PTCHD3Q3KNS1 767 aa17.81■□□□□ 0.44
UPK3BP1-201ENST00000428678 KDELC1Q6UW63 502 aa17.81■□□□□ 0.44
UPK3BP1-201ENST00000428678 RAB43Q86YS6 212 aa17.81■□□□□ 0.44
UPK3BP1-201ENST00000428678 OR4E2Q8NGC2 313 aa17.81■□□□□ 0.44
UPK3BP1-201ENST00000428678 OR1L3Q8NH93 324 aa17.81■□□□□ 0.44
UPK3BP1-201ENST00000428678 NAT14Q8WUY8 206 aa17.81■□□□□ 0.44
UPK3BP1-201ENST00000428678 SNRNP40Q96DI7 357 aaKnown RBP17.81■□□□□ 0.44
UPK3BP1-201ENST00000428678 SGSM3Q96HU1 749 aa17.81■□□□□ 0.44
UPK3BP1-201ENST00000428678 TEKT5Q96M29 485 aa17.81■□□□□ 0.44
UPK3BP1-201ENST00000428678 POMT2Q9UKY4 750 aa17.81■□□□□ 0.44
UPK3BP1-201ENST00000428678 CAPN11Q9UMQ6 739 aa17.81■□□□□ 0.44
UPK3BP1-201ENST00000428678 NENFQ9UMX5 172 aa17.81■□□□□ 0.44
UPK3BP1-201ENST00000428678 LUC7L2Q9Y383 392 aaKnown RBP17.81■□□□□ 0.44
UPK3BP1-201ENST00000428678 MDC1Q14676 2089 aaKnown RBP17.8■□□□□ 0.44
UPK3BP1-201ENST00000428678 LOC285095A0A1B0GVY8 99 aa17.8■□□□□ 0.44
UPK3BP1-201ENST00000428678 GSAPA4D1B5 854 aa17.8■□□□□ 0.44
UPK3BP1-201ENST00000428678 C9J4A7 227 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms