RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 SCARF2Q96GP6 870 aaPredicted RBP8.91□□□□□ -0.98
NR1I3-209ENST00000428574 FOPNLQ96NB1 174 aa8.91□□□□□ -0.98
NR1I3-209ENST00000428574 TMEM237Q96Q45 408 aa8.91□□□□□ -0.98
NR1I3-209ENST00000428574 TIMM29Q9BSF4 260 aa8.91□□□□□ -0.98
NR1I3-209ENST00000428574 PARVBQ9HBI1 364 aa8.91□□□□□ -0.98
NR1I3-209ENST00000428574 SARS2Q9NP81 518 aaKnown RBP8.91□□□□□ -0.98
NR1I3-209ENST00000428574 PFDN4Q9NQP4 134 aa8.91□□□□□ -0.98
NR1I3-209ENST00000428574 DNAJC28Q9NX36 388 aa8.91□□□□□ -0.98
NR1I3-209ENST00000428574 GALPQ9UBC7 116 aa8.91□□□□□ -0.98
NR1I3-209ENST00000428574 FBXL21Q9UKT6 434 aa8.91□□□□□ -0.98
NR1I3-209ENST00000428574 NDRG2Q9UN36 371 aaKnown RBP8.91□□□□□ -0.98
NR1I3-209ENST00000428574 APOBEC2Q9Y235 224 aaKnown RBP8.91□□□□□ -0.98
NR1I3-209ENST00000428574 COQ6Q9Y2Z9 468 aa8.91□□□□□ -0.98
NR1I3-209ENST00000428574 SZT2Q5T011 3432 aa8.91□□□□□ -0.98
NR1I3-209ENST00000428574 NPEPPSL1A6NEC2 478 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 TRPC5OSA6NMA1 111 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 IQCF5A8MTL0 148 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 SUPT3HB4E1H0 165 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 CACNB4O00305 520 aaPredicted RBP8.9□□□□□ -0.98
NR1I3-209ENST00000428574 CDC7O00311 574 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 MATN2O00339 956 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 PLK4O00444 970 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 TNFRSF10CO14798 259 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 HDAC3O15379 428 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 FFAR2O15552 330 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 PSIP1O75475 530 aaKnown RBP8.9□□□□□ -0.98
NR1I3-209ENST00000428574 SUPT3HO75486 399 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 CATP04040 527 aaKnown RBP8.9□□□□□ -0.98
NR1I3-209ENST00000428574 RPN2P04844 631 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 ANXA5P08758 320 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 PCSK2P16519 638 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 HNRNPA2B1P22626 353 aaKnown RBP8.9□□□□□ -0.98
NR1I3-209ENST00000428574 HOXA6P31267 233 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 RPL14P50914 215 aaKnown RBP8.9□□□□□ -0.98
NR1I3-209ENST00000428574 CLCNKAP51800 687 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 PKNOX1P55347 436 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 PCDH1Q08174 1060 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 LCP2Q13094 533 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 FZD5Q13467 585 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 IRF4Q15306 451 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 TBCCQ15814 346 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 KHDC1Q4VXA5 237 aaKnown RBP8.9□□□□□ -0.98
NR1I3-209ENST00000428574 ARL13AQ5H913 290 aaPredicted RBP8.9□□□□□ -0.98
NR1I3-209ENST00000428574 SH2D4BQ5SQS7 431 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 METTL21CQ5VZV1 264 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 CES4AQ5XG92 561 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 SEL1L3Q68CR1 1132 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 ANKS6Q68DC2 871 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 TMEM220Q6QAJ8 160 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 UNC5DQ6UXZ4 953 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 NAPRTQ6XQN6 538 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 ZCCHC23Q6ZST2 131 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 SPATA6LQ8N4H0 392 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 PTGR2Q8N8N7 351 aaPredicted RBP8.9□□□□□ -0.98
NR1I3-209ENST00000428574 TSTD1Q8NFU3 115 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 MAGEC3Q8TD91 643 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 MCOLN3Q8TDD5 553 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 ZNF483Q8TF39 744 aaPredicted RBP8.9□□□□□ -0.98
NR1I3-209ENST00000428574 SGF29Q96ES7 293 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 CCDC97Q96F63 343 aaPredicted RBP8.9□□□□□ -0.98
NR1I3-209ENST00000428574 NUSAP1Q9BXS6 441 aaKnown RBP8.9□□□□□ -0.98
NR1I3-209ENST00000428574 GSTO2Q9H4Y5 243 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 LMAN1LQ9HAT1 526 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 ATXN10Q9UBB4 475 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 EBF1Q9UH73 591 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 PTBP2Q9UKA9 531 aaKnown RBP8.9□□□□□ -0.98
NR1I3-209ENST00000428574 SLC17A4Q9Y2C5 497 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 HS3ST3A1Q9Y663 406 aa8.9□□□□□ -0.98
NR1I3-209ENST00000428574 F5P12259 2224 aa8.89□□□□□ -0.99
NR1I3-209ENST00000428574 TBC1D3DA0A087WVF3 549 aa8.89□□□□□ -0.99
NR1I3-209ENST00000428574 TBC1D3IA0A087WXS9 549 aa8.89□□□□□ -0.99
NR1I3-209ENST00000428574 TBC1D3EA0A087X179 549 aa8.89□□□□□ -0.99
NR1I3-209ENST00000428574 TBC1D3KA0A087X1G2 549 aa8.89□□□□□ -0.99
NR1I3-209ENST00000428574 CCDC163A0A0D9SF12 145 aa8.89□□□□□ -0.99
NR1I3-209ENST00000428574 KRBA1A5PL33 1030 aa8.89□□□□□ -0.99
NR1I3-209ENST00000428574 TBC1D3FA6NER0 549 aaPredicted RBP8.89□□□□□ -0.99
NR1I3-209ENST00000428574 ANTXRLA6NF34 631 aa8.89□□□□□ -0.99
NR1I3-209ENST00000428574 TBC1D3LB9A6J9 549 aa8.89□□□□□ -0.99
NR1I3-209ENST00000428574 PRAMEF26H0Y7S4 382 aa8.89□□□□□ -0.99
NR1I3-209ENST00000428574 K7ESM1 405 aa8.89□□□□□ -0.99
NR1I3-209ENST00000428574 UBXN8O00124 270 aa8.89□□□□□ -0.99
NR1I3-209ENST00000428574 FPGTO14772 594 aa8.89□□□□□ -0.99
NR1I3-209ENST00000428574 SLC22A2O15244 555 aa8.89□□□□□ -0.99
NR1I3-209ENST00000428574 INPP4BO15327 924 aa8.89□□□□□ -0.99
NR1I3-209ENST00000428574 HNRNPCL1O60812 293 aaKnown RBP8.89□□□□□ -0.99
NR1I3-209ENST00000428574 KATNA1O75449 491 aa8.89□□□□□ -0.99
NR1I3-209ENST00000428574 APBB3O95704 486 aa8.89□□□□□ -0.99
NR1I3-209ENST00000428574 SEMA4FO95754 770 aa8.89□□□□□ -0.99
NR1I3-209ENST00000428574 PCCBP05166 539 aa8.89□□□□□ -0.99
NR1I3-209ENST00000428574 HIST1H2AGP0C0S8 130 aaPredicted RBP8.89□□□□□ -0.99
NR1I3-209ENST00000428574 TBC1D3HP0C7X1 549 aa8.89□□□□□ -0.99
NR1I3-209ENST00000428574 HIST1H2ADP20671 130 aa8.89□□□□□ -0.99
NR1I3-209ENST00000428574 AKT2P31751 481 aa8.89□□□□□ -0.99
NR1I3-209ENST00000428574 IGFALSP35858 605 aa8.89□□□□□ -0.99
NR1I3-209ENST00000428574 GMPRP36959 345 aa8.89□□□□□ -0.99
NR1I3-209ENST00000428574 KCNC1P48547 511 aa8.89□□□□□ -0.99
NR1I3-209ENST00000428574 ARFIP2P53365 341 aa8.89□□□□□ -0.99
NR1I3-209ENST00000428574 PGGT1BP53609 377 aa8.89□□□□□ -0.99
NR1I3-209ENST00000428574 CTSCP53634 463 aa8.89□□□□□ -0.99
NR1I3-209ENST00000428574 INHBCP55103 352 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms