RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 CCM2Q9BSQ5 444 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 EFHD1Q9BUP0 239 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 ZNF768Q9H5H4 540 aaKnown RBP9.08□□□□□ -0.96
NUP50-206ENST00000422489 LRRC40Q9H9A6 602 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 ARNT2Q9HBZ2 717 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 PDE7BQ9NP56 450 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 SIDT1Q9NXL6 827 aaKnown RBP9.08□□□□□ -0.96
NUP50-206ENST00000422489 ZDHHC3Q9NYG2 299 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 EPHA6Q9UF33 1036 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 IL17BQ9UHF5 180 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 FEZ2Q9UHY8 353 aaPredicted RBP9.08□□□□□ -0.96
NUP50-206ENST00000422489 ZNF148Q9UQR1 794 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 COLEC10Q9Y6Z7 277 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 ATRXP46100 2492 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 IGHV5-51A0A0C4DH38 117 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 E7EVH7 732 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 J3QKU1 62 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 GAS8O95995 478 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 IFNB1P01574 187 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 SFTPCP11686 197 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 FOLR1P15328 257 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 NELFEP18615 380 aaKnown RBP9.07□□□□□ -0.96
NUP50-206ENST00000422489 POLR2CP19387 275 aaPredicted RBP9.07□□□□□ -0.96
NUP50-206ENST00000422489 STIP1P31948 543 aaKnown RBP9.07□□□□□ -0.96
NUP50-206ENST00000422489 DLSTP36957 453 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 CCR10P46092 362 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 ZNF140P52738 457 aaPredicted RBP9.07□□□□□ -0.96
NUP50-206ENST00000422489 GDF10P55107 478 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 NFKB2Q00653 900 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 IL11RAQ14626 422 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 KCNAB1Q14722 419 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 DEFB109BQ30KR1 87 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 P3H1Q32P28 736 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 GPR33Q49SQ1 333 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 BCL7AQ4VC05 210 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 CCDC38Q502W7 563 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 KCTD11Q693B1 232 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 BORAQ6PGQ7 559 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 FBXO38Q6PIJ6 1188 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 PPP1R21Q6ZMI0 780 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 PRSS42Q7Z5A4 293 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 OOSP2Q86WS3 158 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 PPP1R3BQ86XI6 285 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 OR52K1Q8NGK4 314 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 SLC35B2Q8TB61 432 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 C1orf54Q8WWF1 131 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 UBXN4Q92575 508 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 STAMBPL1Q96FJ0 436 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 CDKN2AIPNLQ96HQ2 116 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 SLC45A3Q96JT2 553 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 RAB33BQ9H082 229 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 ETNK1Q9HBU6 452 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 NLE1Q9NVX2 485 aaPredicted RBP9.07□□□□□ -0.96
NUP50-206ENST00000422489 SMARCAL1Q9NZC9 954 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 SLC24A2Q9UI40 661 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 LNPEPQ9UIQ6 1025 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 RARRES3Q9UL19 164 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 TMEM184BQ9Y519 407 aaPredicted RBP9.07□□□□□ -0.96
NUP50-206ENST00000422489 MRPS18BQ9Y676 258 aaKnown RBP9.07□□□□□ -0.96
NUP50-206ENST00000422489 CAPN6Q9Y6Q1 641 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 RPS6KL1Q9Y6S9 549 aa9.07□□□□□ -0.96
NUP50-206ENST00000422489 CELSR3Q9NYQ7 3312 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 KLHL33A6NCF5 533 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 OR5K3A6NET4 321 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 AGAP14A8MT82 685 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 IFRD1O00458 451 aaPredicted RBP9.06□□□□□ -0.96
NUP50-206ENST00000422489 SGTAO43765 313 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 KRT86O43790 486 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 AP2A1O95782 977 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 NTRK1P04629 796 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 EBLN1P0CF75 366 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 PYGBP11216 843 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 FGF5P12034 268 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 ETS1P14921 441 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 TCN2P20062 427 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 NDUFS1P28331 727 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 PREPP48147 710 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 MC1RQ01726 317 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 CACNG1Q06432 222 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 PRKAA1Q13131 559 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 PRKG2Q13237 762 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 KLF1Q13351 362 aaPredicted RBP9.06□□□□□ -0.96
NUP50-206ENST00000422489 TUBB3Q13509 450 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 ERV3-1Q14264 604 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 BRD3Q15059 726 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 RPS6KA1Q15418 735 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 SKIDA1Q1XH10 827 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 ATP1A1-AS1Q5TC04 95 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 CYB5D1Q6P9G0 228 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 CERS6Q6ZMG9 384 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 PRUNE1Q86TP1 453 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 LINC00523Q86TU6 105 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 PTRH1Q86Y79 214 aaKnown RBP9.06□□□□□ -0.96
NUP50-206ENST00000422489 SLC13A5Q86YT5 568 aaPredicted RBP9.06□□□□□ -0.96
NUP50-206ENST00000422489 CLDN19Q8N6F1 224 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 HM13Q8TCT9 377 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 STYXQ8WUJ0 223 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 ZFPM2Q8WW38 1151 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 LCN9Q8WX39 176 aa9.06□□□□□ -0.96
NUP50-206ENST00000422489 LINC00615Q96LM1 132 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms