RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 UTRNP46939 3433 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 CD8B2A6NJW9 211 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 C2CD4BA6NLJ0 364 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 TMEM189-UBE2V1I3L0A0 370 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 M0QZQ0 153 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 TULP2O00295 520 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 CLDN5O00501 218 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 RRHO14718 337 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 CAPN9O14815 690 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 SYN3O14994 580 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 KPNA5O15131 536 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 RAD51CO43502 376 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 ATP2C2O75185 946 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 COQ9O75208 318 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 TULP3O75386 442 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 DAB1O75553 588 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 GRAP2O75791 330 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 DDHD2O94830 711 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 GAS8O95995 478 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 CXCL10P02778 98 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 RALAP11233 206 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 H2AFXP16104 143 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 PDGFRAP16234 1089 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 CAPN2P17655 700 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 CHRNA3P32297 505 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 RDXP35241 583 aaKnown RBP3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 RFC1P35251 1148 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 FNTAP49354 379 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 VSNL1P62760 191 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 HTRA4P83105 476 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 DR1Q01658 176 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 OGDHQ02218 1023 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 GUCY2DQ02846 1103 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 DSC1Q08554 894 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 MTAPQ13126 283 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 DAG1Q14118 895 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 PPP1R7Q15435 360 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 SMTNL2Q2TAL5 461 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 P3H1Q32P28 736 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 CTXN3Q4LDR2 81 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 EFHC1Q5JVL4 640 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 FAXCQ5TGI0 409 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 LRRC38Q5VT99 294 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 AADACL2Q6P093 401 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 PMF1Q6P1K2 205 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 WDR93Q6P2C0 686 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 SCYL2Q6P3W7 929 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 CCDC137Q6PK04 289 aaKnown RBP3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 DEF8Q6ZN54 512 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 CLEC20AQ6ZU45 233 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 MAATS1Q7Z4T9 603 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 PIGZQ86VD9 579 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 CEP57Q86XR8 500 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 RFX6Q8HWS3 928 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 IFT20Q8IY31 132 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 CCDC105Q8IYK2 499 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 RCOR2Q8IZ40 523 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 TMEM199Q8N511 208 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 WDTC1Q8N5D0 677 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 NIPA2Q8N8Q9 360 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 EXD1Q8NHP7 514 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 SUN3Q8TAQ9 357 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 ABHD5Q8WTS1 349 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 FAM172AQ8WUF8 416 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 SLC35F5Q8WV83 523 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 RXFP2Q8WXD0 754 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 HSPH1Q92598 858 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 CD101Q93033 1021 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 MAGOHBQ96A72 148 aaKnown RBP3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 PCED1BQ96HM7 432 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 CFAP57Q96MR6 1250 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 FCRL5Q96RD9 977 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 RUFY1Q96T51 708 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 ACBD6Q9BR61 282 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 CNPY3Q9BT09 278 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 LRRC1Q9BTT6 524 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 TRIM62Q9BVG3 475 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 CALN1Q9BXU9 219 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 MAK16Q9BXY0 300 aaKnown RBP3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 DUSP16Q9BY84 665 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 OSBPL8Q9BZF1 889 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 ULBP1Q9BZM6 244 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 PLEKHA4Q9H4M7 779 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 ANKZF1Q9H8Y5 726 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 DMAP1Q9NPF5 467 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 HOMER3Q9NSC5 361 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 DNAJB4Q9UDY4 337 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 AMACRQ9UHK6 382 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 ADAM28Q9UKQ2 775 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 RAB21Q9UL25 225 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 UTP11Q9Y3A2 253 aaKnown RBP3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 PLXNA4Q9HCM2 1894 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 TTC3P53804 2025 aa3.87□□□□□ -1.79
HMGB3P20-201ENST00000417997 GBF1Q92538 1859 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 GREB1Q4ZG55 1949 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 SYNJ2BP-COX16A0A087WUM0 186 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 ABHD14A-ACY1A0A1B0GW23 586 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 SLC22A23A1A5C7 686 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 MYBPHLA2RUH7 354 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms