RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 FAM92BQ6ZTR7 304 aa18.62■□□□□ 0.57
SF3A1-202ENST00000411423 ZNF534Q76KX8 674 aa18.62■□□□□ 0.57
SF3A1-202ENST00000411423 CCDC89Q8N998 374 aa18.62■□□□□ 0.57
SF3A1-202ENST00000411423 HM13Q8TCT9 377 aa18.62■□□□□ 0.57
SF3A1-202ENST00000411423 TTC9Q92623 222 aa18.62■□□□□ 0.57
SF3A1-202ENST00000411423 NKD1Q969G9 470 aa18.62■□□□□ 0.57
SF3A1-202ENST00000411423 HDAC10Q969S8 669 aa18.62■□□□□ 0.57
SF3A1-202ENST00000411423 RANBP9Q96S59 729 aa18.62■□□□□ 0.57
SF3A1-202ENST00000411423 COG4Q9H9E3 785 aa18.62■□□□□ 0.57
SF3A1-202ENST00000411423 E7EVH7 732 aa18.61■□□□□ 0.57
SF3A1-202ENST00000411423 GOT2P00505 430 aaKnown RBP18.61■□□□□ 0.57
SF3A1-202ENST00000411423 RALBP11234 206 aa18.61■□□□□ 0.57
SF3A1-202ENST00000411423 CD82P27701 267 aa18.61■□□□□ 0.57
SF3A1-202ENST00000411423 LMAN1P49257 510 aa18.61■□□□□ 0.57
SF3A1-202ENST00000411423 CRADDP78560 199 aa18.61■□□□□ 0.57
SF3A1-202ENST00000411423 ACVR1Q04771 509 aa18.61■□□□□ 0.57
SF3A1-202ENST00000411423 TIPARPQ7Z3E1 657 aaKnown RBP18.61■□□□□ 0.57
SF3A1-202ENST00000411423 CCM2Q9BSQ5 444 aa18.61■□□□□ 0.57
SF3A1-202ENST00000411423 OR52A5Q9H2C5 316 aa18.61■□□□□ 0.57
SF3A1-202ENST00000411423 ZNF768Q9H5H4 540 aaKnown RBP18.61■□□□□ 0.57
SF3A1-202ENST00000411423 FBXO8Q9NRD0 319 aa18.61■□□□□ 0.57
SF3A1-202ENST00000411423 EPHA6Q9UF33 1036 aa18.61■□□□□ 0.57
SF3A1-202ENST00000411423 ACSL5Q9ULC5 683 aa18.61■□□□□ 0.57
SF3A1-202ENST00000411423 ZKSCAN5Q9Y2L8 839 aa18.61■□□□□ 0.57
SF3A1-202ENST00000411423 TCAF1Q9Y4C2 921 aa18.61■□□□□ 0.57
SF3A1-202ENST00000411423 C17orf113A0A1B0GUU1 675 aa18.6■□□□□ 0.57
SF3A1-202ENST00000411423 HEATR9A2RTY3 570 aa18.6■□□□□ 0.57
SF3A1-202ENST00000411423 CFAP99D6REC4 459 aa18.6■□□□□ 0.57
SF3A1-202ENST00000411423 STMND1H3BQB6 276 aa18.6■□□□□ 0.57
SF3A1-202ENST00000411423 ATXN7O15265 892 aaPredicted RBP18.6■□□□□ 0.57
SF3A1-202ENST00000411423 OR1I1O60431 355 aa18.6■□□□□ 0.57
SF3A1-202ENST00000411423 C1QL1O75973 258 aa18.6■□□□□ 0.57
SF3A1-202ENST00000411423 ADRA1DP25100 572 aa18.6■□□□□ 0.57
SF3A1-202ENST00000411423 PREPP48147 710 aa18.6■□□□□ 0.57
SF3A1-202ENST00000411423 TRIP13Q15645 432 aaPredicted RBP18.6■□□□□ 0.57
SF3A1-202ENST00000411423 SKIDA1Q1XH10 827 aa18.6■□□□□ 0.57
SF3A1-202ENST00000411423 DCAF12Q5T6F0 453 aa18.6■□□□□ 0.57
SF3A1-202ENST00000411423 TMEM164Q5U3C3 297 aa18.6■□□□□ 0.57
SF3A1-202ENST00000411423 IRGCQ6NXR0 463 aa18.6■□□□□ 0.57
SF3A1-202ENST00000411423 NAPRTQ6XQN6 538 aa18.6■□□□□ 0.57
SF3A1-202ENST00000411423 CERS6Q6ZMG9 384 aa18.6■□□□□ 0.57
SF3A1-202ENST00000411423 PRSS42Q7Z5A4 293 aa18.6■□□□□ 0.57
SF3A1-202ENST00000411423 RASGEF1CQ8N431 466 aa18.6■□□□□ 0.57
SF3A1-202ENST00000411423 HEXDCQ8WVB3 486 aa18.6■□□□□ 0.57
SF3A1-202ENST00000411423 KLHL6Q8WZ60 621 aa18.6■□□□□ 0.57
SF3A1-202ENST00000411423 RAB33BQ9H082 229 aa18.6■□□□□ 0.57
SF3A1-202ENST00000411423 CHRAC1Q9NRG0 131 aa18.6■□□□□ 0.57
SF3A1-202ENST00000411423 SLC24A2Q9UI40 661 aa18.6■□□□□ 0.57
SF3A1-202ENST00000411423 IGHV5-51A0A0C4DH38 117 aa18.59■□□□□ 0.57
SF3A1-202ENST00000411423 SLC35G4P0C7Q5 338 aa18.59■□□□□ 0.57
SF3A1-202ENST00000411423 ZNF28P17035 718 aa18.59■□□□□ 0.57
SF3A1-202ENST00000411423 ARCN1P48444 511 aaKnown RBP18.59■□□□□ 0.57
SF3A1-202ENST00000411423 TERF1P54274 439 aa18.59■□□□□ 0.57
SF3A1-202ENST00000411423 SESN2P58004 480 aaPredicted RBP18.59■□□□□ 0.57
SF3A1-202ENST00000411423 RAB15P59190 212 aa18.59■□□□□ 0.57
SF3A1-202ENST00000411423 BASP1P80723 227 aaKnown RBP18.59■□□□□ 0.57
SF3A1-202ENST00000411423 CACHD1Q5VU97 1274 aa18.59■□□□□ 0.57
SF3A1-202ENST00000411423 SLC35F6Q8N357 371 aa18.59■□□□□ 0.57
SF3A1-202ENST00000411423 PHC3Q8NDX5 983 aa18.59■□□□□ 0.57
SF3A1-202ENST00000411423 PPM1MQ96MI6 270 aa18.59■□□□□ 0.57
SF3A1-202ENST00000411423 KIR3DX1Q9H7L2 352 aa18.59■□□□□ 0.57
SF3A1-202ENST00000411423 EIF2B3Q9NR50 452 aaKnown RBP18.59■□□□□ 0.57
SF3A1-202ENST00000411423 SEMA5BQ9P283 1151 aa18.59■□□□□ 0.57
SF3A1-202ENST00000411423 PILRAQ9UKJ1 303 aa18.59■□□□□ 0.57
SF3A1-202ENST00000411423 RIMKLBQ9ULI2 386 aa18.59■□□□□ 0.57
SF3A1-202ENST00000411423 TTC7AQ9ULT0 858 aaPredicted RBP18.59■□□□□ 0.57
SF3A1-202ENST00000411423 KLHL33A6NCF5 533 aa18.58■□□□□ 0.56
SF3A1-202ENST00000411423 GOLGA6L3A6NEY3 463 aa18.58■□□□□ 0.56
SF3A1-202ENST00000411423 RAD1O60671 282 aa18.58■□□□□ 0.56
SF3A1-202ENST00000411423 RASSF9O75901 435 aa18.58■□□□□ 0.56
SF3A1-202ENST00000411423 CYP4F2P78329 520 aa18.58■□□□□ 0.56
SF3A1-202ENST00000411423 ITIH4Q14624 930 aa18.58■□□□□ 0.56
SF3A1-202ENST00000411423 PLCL1Q15111 1095 aa18.58■□□□□ 0.56
SF3A1-202ENST00000411423 MANEAQ5SRI9 462 aa18.58■□□□□ 0.56
SF3A1-202ENST00000411423 FBXO38Q6PIJ6 1188 aa18.58■□□□□ 0.56
SF3A1-202ENST00000411423 PACS1Q6VY07 963 aa18.58■□□□□ 0.56
SF3A1-202ENST00000411423 GSTA5Q7RTV2 222 aa18.58■□□□□ 0.56
SF3A1-202ENST00000411423 LDB1Q86U70 411 aaPredicted RBP18.58■□□□□ 0.56
SF3A1-202ENST00000411423 LKAAEAR1Q8TD35 194 aa18.58■□□□□ 0.56
SF3A1-202ENST00000411423 COG1Q8WTW3 980 aa18.58■□□□□ 0.56
SF3A1-202ENST00000411423 MAIP1Q8WWC4 291 aa18.58■□□□□ 0.56
SF3A1-202ENST00000411423 SLC39A7Q92504 469 aa18.58■□□□□ 0.56
SF3A1-202ENST00000411423 MAP3K3Q99759 626 aa18.58■□□□□ 0.56
SF3A1-202ENST00000411423 AP1M1Q9BXS5 423 aa18.58■□□□□ 0.56
SF3A1-202ENST00000411423 SEMA4CQ9C0C4 833 aa18.58■□□□□ 0.56
SF3A1-202ENST00000411423 MARCH4Q9P2E8 410 aaPredicted RBP18.58■□□□□ 0.56
SF3A1-202ENST00000411423 PCDHGA4Q9Y5G9 962 aa18.58■□□□□ 0.56
SF3A1-202ENST00000411423 OR5K3A6NET4 321 aa18.57■□□□□ 0.56
SF3A1-202ENST00000411423 TOX3O15405 576 aaPredicted RBP18.57■□□□□ 0.56
SF3A1-202ENST00000411423 AP2A2O94973 939 aa18.57■□□□□ 0.56
SF3A1-202ENST00000411423 DLGAP3O95886 979 aa18.57■□□□□ 0.56
SF3A1-202ENST00000411423 NMBRP28336 390 aa18.57■□□□□ 0.56
SF3A1-202ENST00000411423 VPS41P49754 854 aa18.57■□□□□ 0.56
SF3A1-202ENST00000411423 KCNAB1Q14722 419 aa18.57■□□□□ 0.56
SF3A1-202ENST00000411423 ANKRD22Q5VYY1 191 aa18.57■□□□□ 0.56
SF3A1-202ENST00000411423 AFTPHQ6ULP2 937 aa18.57■□□□□ 0.56
SF3A1-202ENST00000411423 CEACAM20Q6UY09 585 aa18.57■□□□□ 0.56
SF3A1-202ENST00000411423 OR6C1Q96RD1 312 aa18.57■□□□□ 0.56
SF3A1-202ENST00000411423 ASPSCR1Q9BZE9 553 aa18.57■□□□□ 0.56
SF3A1-202ENST00000411423 TREX1Q9NSU2 369 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms