RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 FZD3Q9NPG1 666 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 XPR1Q9UBH6 696 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 INO80Q9ULG1 1556 aaPredicted RBP8.31□□□□□ -1.08
SCN9A-203ENST00000409672 A0A1W2PPL8 197 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 PLD2O14939 933 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 CLCNKAP51800 687 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 MZT2BQ6NZ67 158 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 USP53Q70EK8 1073 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 ADAMTSL2Q86TH1 951 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 SFRP1Q8N474 314 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 MEIOBQ8N635 442 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 C11orf24Q96F05 449 aaPredicted RBP8.31□□□□□ -1.08
SCN9A-203ENST00000409672 Q96MT0 163 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 RNF157Q96PX1 679 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 PKP4Q99569 1192 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 TPSD1Q9BZJ3 242 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 LACRTQ9GZZ8 138 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 ANKHQ9HCJ1 492 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 TLR9Q9NR96 1032 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 STOML2Q9UJZ1 356 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 TBC1D30Q9Y2I9 924 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 CEP170BQ9Y4F5 1589 aaPredicted RBP8.31□□□□□ -1.08
SCN9A-203ENST00000409672 A0A1B0GVT2 93 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 RGSL1A5PLK6 1076 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 CYP17A1P05093 508 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 ITGA5P08648 1049 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 ITGA2P17301 1181 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 CXCR1P25024 350 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 PLEKHG6Q3KR16 790 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 ANXA8L1Q5VT79 327 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 SMYD5Q6GMV2 418 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 CERS5Q8N5B7 392 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 OR5T2Q8NGG2 359 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 THEM6Q8WUY1 208 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 BTBD1Q9H0C5 482 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 FAM83DQ9H4H8 585 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 MORF4L1Q9UBU8 362 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 PLEKHA6Q9Y2H5 1048 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 SCDO00767 359 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 CCR10P46092 362 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 KLF1Q13351 362 aaPredicted RBP8.3□□□□□ -1.08
SCN9A-203ENST00000409672 RNF43Q68DV7 783 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 CYB5D1Q6P9G0 228 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 ZNF761Q86XN6 746 aaPredicted RBP8.3□□□□□ -1.08
SCN9A-203ENST00000409672 BADQ92934 168 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 TGM7Q96PF1 710 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 GFM1Q96RP9 751 aaKnown RBP8.3□□□□□ -1.08
SCN9A-203ENST00000409672 COPG2Q9UBF2 871 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 KCNK6Q9Y257 313 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 ZNF878C9JN71 531 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 WFS1O76024 890 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 ANXA4P09525 319 aaPredicted RBP8.3□□□□□ -1.08
SCN9A-203ENST00000409672 CD247P20963 164 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 MATKP42679 507 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 BTBD10Q9BSF8 475 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 CORO2BQ9UQ03 480 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 DGKBQ9Y6T7 804 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 WASHC1A8K0Z3 465 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 WASH3PC4AMC7 463 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 H0YGN5 161 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 APOC4-APOC2K7ER74 178 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 UGT1A9O60656 530 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 CST3P01034 146 aaPredicted RBP8.3□□□□□ -1.08
SCN9A-203ENST00000409672 APOC2P02655 101 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 ZNF20P17024 532 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 UGT1A6P19224 532 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 UGT1A1P22309 533 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 UGT1A4P22310 534 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 UGT1A3P35503 534 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 CLCN5P51795 746 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 RIPK1Q13546 671 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 GTF2H2Q13888 395 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 RRP1BQ14684 758 aaKnown RBP8.3□□□□□ -1.08
SCN9A-203ENST00000409672 GTF2H2CQ6P1K8 395 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 WASH2PQ6VEQ5 465 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 PXYLP1Q8TE99 480 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 ZNF570Q96NI8 536 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 UNC93B1Q9H1C4 597 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 UGT1A7Q9HAW7 530 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 UGT1A10Q9HAW8 530 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 UGT1A8Q9HAW9 530 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 ENAMQ9NRM1 1142 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 KCTD5Q9NXV2 234 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 UPB1Q9UBR1 384 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 ZSCAN5BA6NJL1 495 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 RIIAD1A6NNX1 92 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 E7EQ34 232 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 SNX4O95219 450 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 ACVR2AP27037 513 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 GKP32189 559 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 STAT5AP42229 794 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 ASMTP46597 345 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 ACTR3P61158 418 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 MCL1Q07820 350 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 EOGTQ5NDL2 527 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 ABHD13Q7L211 337 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 CEP97Q8IW35 865 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 MTRRQ9UBK8 725 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 MYRFQ9Y2G1 1151 aa8.3□□□□□ -1.08
SCN9A-203ENST00000409672 CIB4A0PJX0 185 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms