RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 PDIA2Q13087 525 aaKnown RBP10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 CTBP1Q13363 440 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 GPR18Q14330 331 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 NR1D2Q14995 579 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 LONRF1Q17RB8 773 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 ISXQ2M1V0 245 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 TYSND1Q2T9J0 566 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 CTSL3PQ5NE16 218 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 SNAP47Q5SQN1 464 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 METRNLQ641Q3 311 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 PTRHD1Q6GMV3 140 aaKnown RBP10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 ABRAXAS1Q6UWZ7 409 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 UNQ6494/PRO21346Q6UXR6 183 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 USP53Q70EK8 1073 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 MAATS1Q7Z4T9 603 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 KCNMB4Q86W47 210 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 DENND6AQ8IWF6 608 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 PDIK1LQ8N165 341 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 NOA1Q8NC60 698 aaKnown RBP10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 OR10G6Q8NH81 332 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 KIF18AQ8NI77 898 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 MDM1Q8TC05 714 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 LPGAT1Q92604 370 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 RSC1A1Q92681 617 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 AHCYL2Q96HN2 611 aaKnown RBP10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 SGSM3Q96HU1 749 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 LINC00615Q96LM1 132 aaPredicted RBP10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 INSM2Q96T92 566 aaPredicted RBP10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 EBNA1BP2Q99848 306 aaKnown RBP10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 ERP44Q9BS26 406 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 HGH1Q9BTY7 390 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 TMEM121BQ9BXQ6 578 aaPredicted RBP10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 RAB17Q9H0T7 212 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 FBXO6Q9NRD1 293 aaPredicted RBP10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 IARS2Q9NSE4 1012 aaKnown RBP10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 GRHL1Q9NZI5 618 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 KLHL3Q9UH77 587 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 GNPTGQ9UJJ9 305 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 SATB2Q9UPW6 733 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 CRYL1Q9Y2S2 319 aa10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 UTP11Q9Y3A2 253 aaKnown RBP10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 DNMT3AQ9Y6K1 912 aaPredicted RBP10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 MAP1BP46821 2468 aaKnown RBP10.06□□□□□ -0.8
TSPAN9-202ENST00000407263 CEP295Q9C0D2 2601 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 LILRA5A6NI73 299 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 QSOX1O00391 747 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 KCNJ13O60928 360 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 CPNE6O95741 557 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 MPOP05164 745 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 ERVK-10P10266 1014 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 HGFP14210 728 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 XRCC1P18887 633 aaPredicted RBP10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 CD1CP29017 333 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 FMO4P31512 558 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 PPARGP37231 505 aaPredicted RBP10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 ABCG1P45844 678 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 GPR3P46089 330 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 INHBCP55103 352 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 GFERP55789 205 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 GABREP78334 506 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 CAMK2BQ13554 666 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 TRADDQ15628 312 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 ZNF658BQ4V348 819 aaPredicted RBP10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 HSP90AA5PQ58FG0 334 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 ZNF789Q5FWF6 425 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 SPANXN3Q5MJ09 141 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 RNF187Q5TA31 235 aaPredicted RBP10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 DUPD1Q68J44 220 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 NEPROQ6NW34 567 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 WASH2PQ6VEQ5 465 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 UNC5AQ6ZN44 842 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 TMEM26Q6ZUK4 368 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 CENPUQ71F23 418 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 SDCCAG8Q86SQ7 713 aaPredicted RBP10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 TMEM135Q86UB9 458 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 CILP2Q8IUL8 1156 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 SPNS2Q8IVW8 549 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 SLITRK4Q8IW52 837 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 ZBED8Q8IZ13 594 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 AVL9Q8NBF6 648 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 BBOF1Q8ND07 529 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 RCBTB1Q8NDN9 531 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 FBXO36Q8NEA4 188 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 WDR48Q8TAF3 677 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 NXPE2Q96DL1 559 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 CCDC74BQ96LY2 380 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 CNTNAP3BQ96NU0 1288 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 FAM167BQ9BTA0 163 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 LRRC1Q9BTT6 524 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 TSSK1BQ9BXA7 367 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 CNTNAP3Q9BZ76 1288 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 P2RY12Q9H244 342 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 OR52A5Q9H2C5 316 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 SEMA6CQ9H3T2 930 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 WASH6PQ9NQA3 447 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 WHRNQ9P202 907 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 ZC3H7BQ9UGR2 993 aaKnown RBP10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 CHD8Q9HCK8 2581 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 IGF2RP11717 2491 aa10.05□□□□□ -0.8
TSPAN9-202ENST00000407263 SDK2Q58EX2 2172 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms