RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 PATJQ8NI35 1801 aa16.15■□□□□ 0.18
CDK11B-204ENST00000407249 TMEM189-UBE2V1I3L0A0 370 aa16.15■□□□□ 0.18
CDK11B-204ENST00000407249 CDK14O94921 469 aa16.15■□□□□ 0.18
CDK11B-204ENST00000407249 CPNE6O95741 557 aa16.15■□□□□ 0.18
CDK11B-204ENST00000407249 ZNF182P17025 639 aaPredicted RBP16.15■□□□□ 0.18
CDK11B-204ENST00000407249 NUDT1P36639 197 aa16.15■□□□□ 0.18
CDK11B-204ENST00000407249 ARL1P40616 181 aaPredicted RBP16.15■□□□□ 0.18
CDK11B-204ENST00000407249 YAP1P46937 504 aaKnown RBP16.15■□□□□ 0.18
CDK11B-204ENST00000407249 CDKN2DP55273 166 aa16.15■□□□□ 0.18
CDK11B-204ENST00000407249 NFATC3Q12968 1075 aa16.15■□□□□ 0.18
CDK11B-204ENST00000407249 FBXO43Q4G163 708 aa16.15■□□□□ 0.18
CDK11B-204ENST00000407249 GLB1LQ6UWU2 654 aa16.15■□□□□ 0.18
CDK11B-204ENST00000407249 CILP2Q8IUL8 1156 aa16.15■□□□□ 0.18
CDK11B-204ENST00000407249 SPATA2LQ8IUW3 424 aaPredicted RBP16.15■□□□□ 0.18
CDK11B-204ENST00000407249 RNF34Q969K3 372 aa16.15■□□□□ 0.18
CDK11B-204ENST00000407249 RPL10LQ96L21 214 aaKnown RBP16.15■□□□□ 0.18
CDK11B-204ENST00000407249 PPP1R2P1Q96PQ5 205 aa16.15■□□□□ 0.18
CDK11B-204ENST00000407249 ADNPQ9H2P0 1102 aa16.15■□□□□ 0.18
CDK11B-204ENST00000407249 KCNN2Q9H2S1 579 aa16.15■□□□□ 0.18
CDK11B-204ENST00000407249 RBM22Q9NW64 420 aaKnown RBP eCLIP16.15■□□□□ 0.18
CDK11B-204ENST00000407249 PKD2L2Q9NZM6 624 aa16.15■□□□□ 0.18
CDK11B-204ENST00000407249 ATP6V1HQ9UI12 483 aa16.15■□□□□ 0.18
CDK11B-204ENST00000407249 FRMPD3Q5JV73 1810 aa16.15■□□□□ 0.18
CDK11B-204ENST00000407249 MYLKQ15746 1914 aa16.14■□□□□ 0.18
CDK11B-204ENST00000407249 TCRBV5S2A0A599 114 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 FAM172BPA6NC97 362 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 PIP5K1BO14986 540 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 GMNNO75496 209 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 SNAP29O95721 258 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 TRIM23P36406 574 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 FOXA1P55317 472 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 FOXM1Q08050 763 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 PLCL1Q15111 1095 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 COQ5Q5HYK3 327 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 CCNYL2Q5T2Q4 361 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 FCRLBQ6BAA4 426 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 KIAA2013Q8IYS2 634 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 OR13F1Q8NGS4 319 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 PNPT1Q8TCS8 783 aaKnown RBP16.14■□□□□ 0.17
CDK11B-204ENST00000407249 TWIST2Q8WVJ9 160 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 PTERQ96BW5 349 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 USB1Q9BQ65 265 aaKnown RBP16.14■□□□□ 0.17
CDK11B-204ENST00000407249 SLC39A8Q9C0K1 460 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 SIK2Q9H0K1 926 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 INTS10Q9NVR2 710 aaKnown RBP16.14■□□□□ 0.17
CDK11B-204ENST00000407249 A8MU76 341 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 ATP6V1G2-DDX39BF2Z307 99 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 HTR7P34969 479 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 POLR2IP36954 125 aaKnown RBP16.14■□□□□ 0.17
CDK11B-204ENST00000407249 BRCC3P46736 316 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 NKX2-5P52952 324 aaPredicted RBP16.14■□□□□ 0.17
CDK11B-204ENST00000407249 ADARB1P78563 741 aaKnown RBP16.14■□□□□ 0.17
CDK11B-204ENST00000407249 RHAGQ02094 409 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 BLOC1S3Q6QNY0 202 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 SLC24A5Q71RS6 500 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 PTRH1Q86Y79 214 aaKnown RBP16.14■□□□□ 0.17
CDK11B-204ENST00000407249 DCP1BQ8IZD4 617 aaKnown RBP16.14■□□□□ 0.17
CDK11B-204ENST00000407249 PAPD5Q8NDF8 572 aaKnown RBP16.14■□□□□ 0.17
CDK11B-204ENST00000407249 OR13J1Q8NGT2 312 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 SH3RF2Q8TEC5 729 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 TMEM125Q96AQ2 219 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 TRIM54Q9BYV2 358 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 ALG2Q9H553 416 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 POLR3BQ9NW08 1133 aaPredicted RBP16.14■□□□□ 0.17
CDK11B-204ENST00000407249 IFT80Q9P2H3 777 aaPredicted RBP16.14■□□□□ 0.17
CDK11B-204ENST00000407249 ZNF639Q9UID6 485 aa16.14■□□□□ 0.17
CDK11B-204ENST00000407249 HOXC11O43248 304 aaPredicted RBP16.13■□□□□ 0.17
CDK11B-204ENST00000407249 CKBP12277 381 aa16.13■□□□□ 0.17
CDK11B-204ENST00000407249 MATN1P21941 496 aa16.13■□□□□ 0.17
CDK11B-204ENST00000407249 GSK3BP49841 420 aa16.13■□□□□ 0.17
CDK11B-204ENST00000407249 WNT3AP56704 352 aa16.13■□□□□ 0.17
CDK11B-204ENST00000407249 IFNEQ86WN2 208 aa16.13■□□□□ 0.17
CDK11B-204ENST00000407249 ZC3H7AQ8IWR0 971 aaKnown RBP16.13■□□□□ 0.17
CDK11B-204ENST00000407249 TBC1D21Q8IYX1 336 aa16.13■□□□□ 0.17
CDK11B-204ENST00000407249 HOXD1Q9GZZ0 328 aa16.13■□□□□ 0.17
CDK11B-204ENST00000407249 MUC13Q9H3R2 512 aa16.13■□□□□ 0.17
CDK11B-204ENST00000407249 TUBB1Q9H4B7 451 aa16.13■□□□□ 0.17
CDK11B-204ENST00000407249 MID1IP1Q9NPA3 183 aa16.13■□□□□ 0.17
CDK11B-204ENST00000407249 ANKMY1Q9P2S6 941 aa16.13■□□□□ 0.17
CDK11B-204ENST00000407249 AZIN1O14977 448 aa16.13■□□□□ 0.17
CDK11B-204ENST00000407249 CCNA2P20248 432 aa16.13■□□□□ 0.17
CDK11B-204ENST00000407249 NR4A1P22736 598 aa16.13■□□□□ 0.17
CDK11B-204ENST00000407249 TMBIM6P55061 237 aa16.13■□□□□ 0.17
CDK11B-204ENST00000407249 RELQ04864 619 aaPredicted RBP16.13■□□□□ 0.17
CDK11B-204ENST00000407249 ZNF33BQ06732 778 aa16.13■□□□□ 0.17
CDK11B-204ENST00000407249 FCHO2Q0JRZ9 810 aa16.13■□□□□ 0.17
CDK11B-204ENST00000407249 TRAF2Q12933 501 aa16.13■□□□□ 0.17
CDK11B-204ENST00000407249 GEN1Q17RS7 908 aa16.13■□□□□ 0.17
CDK11B-204ENST00000407249 RABL3Q5HYI8 236 aa16.13■□□□□ 0.17
CDK11B-204ENST00000407249 PXDC1Q5TGL8 231 aa16.13■□□□□ 0.17
CDK11B-204ENST00000407249 LDB1Q86U70 411 aaPredicted RBP16.13■□□□□ 0.17
CDK11B-204ENST00000407249 PIM3Q86V86 326 aa16.13■□□□□ 0.17
CDK11B-204ENST00000407249 Q8N9G6 341 aaPredicted RBP16.13■□□□□ 0.17
CDK11B-204ENST00000407249 OR52K2Q8NGK3 314 aa16.13■□□□□ 0.17
CDK11B-204ENST00000407249 SGK3Q96BR1 496 aa16.13■□□□□ 0.17
CDK11B-204ENST00000407249 ASB2Q96Q27 587 aa16.13■□□□□ 0.17
CDK11B-204ENST00000407249 ZNF717Q9BY31 904 aaPredicted RBP16.13■□□□□ 0.17
CDK11B-204ENST00000407249 ARNT2Q9HBZ2 717 aa16.13■□□□□ 0.17
CDK11B-204ENST00000407249 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.13■□□□□ 0.17
CDK11B-204ENST00000407249 TNFRSF10DQ9UBN6 386 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms