RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 RBM20Q5T481 1227 aaKnown RBP28.75■■■□□ 2.19
USP42-202ENST00000404008 EMBQ6PCB8 327 aa28.75■■■□□ 2.19
USP42-202ENST00000404008 SLC35F3Q8IY50 421 aa28.75■■■□□ 2.19
USP42-202ENST00000404008 PATE1Q8WXA2 126 aa28.75■■■□□ 2.19
USP42-202ENST00000404008 ATXN7L3BQ96GX2 97 aa28.75■■■□□ 2.19
USP42-202ENST00000404008 RHOJQ9H4E5 214 aa28.75■■■□□ 2.19
USP42-202ENST00000404008 GALPQ9UBC7 116 aa28.75■■■□□ 2.19
USP42-202ENST00000404008 WDR37Q9Y2I8 494 aa28.75■■■□□ 2.19
USP42-202ENST00000404008 CEP250Q9BV73 2442 aa28.75■■■□□ 2.19
USP42-202ENST00000404008 LY6G6EA0A0G2JKS1 128 aa28.75■■■□□ 2.19
USP42-202ENST00000404008 SLC5A10A0PJK1 596 aa28.75■■■□□ 2.19
USP42-202ENST00000404008 E5RI56 91 aa28.75■■■□□ 2.19
USP42-202ENST00000404008 KPNA5O15131 536 aa28.75■■■□□ 2.19
USP42-202ENST00000404008 GP5P40197 560 aa28.75■■■□□ 2.19
USP42-202ENST00000404008 PREPP48147 710 aa28.75■■■□□ 2.19
USP42-202ENST00000404008 CSE1LP55060 971 aaKnown RBP28.75■■■□□ 2.19
USP42-202ENST00000404008 BRD3Q15059 726 aa28.75■■■□□ 2.19
USP42-202ENST00000404008 SYTL3Q4VX76 610 aa28.75■■■□□ 2.19
USP42-202ENST00000404008 IYDQ6PHW0 289 aa28.75■■■□□ 2.19
USP42-202ENST00000404008 C17orf82Q86X59 251 aaPredicted RBP28.75■■■□□ 2.19
USP42-202ENST00000404008 ASZ1Q8WWH4 475 aa28.75■■■□□ 2.19
USP42-202ENST00000404008 GLMNQ92990 594 aa28.75■■■□□ 2.19
USP42-202ENST00000404008 FAM136AQ96C01 138 aa28.75■■■□□ 2.19
USP42-202ENST00000404008 LATS2Q9NRM7 1088 aa28.75■■■□□ 2.19
USP42-202ENST00000404008 NCKIPSDQ9NZQ3 722 aa28.75■■■□□ 2.19
USP42-202ENST00000404008 SCHIP1Q9P0W5 487 aaPredicted RBP28.75■■■□□ 2.19
USP42-202ENST00000404008 FTSJ1Q9UET6 329 aa28.75■■■□□ 2.19
USP42-202ENST00000404008 PSMD13Q9UNM6 376 aa28.75■■■□□ 2.19
USP42-202ENST00000404008 U3KQA8 63 aa28.75■■■□□ 2.19
USP42-202ENST00000404008 SLC2A4P14672 509 aa28.74■■■□□ 2.19
USP42-202ENST00000404008 CLCN7P51798 805 aa28.74■■■□□ 2.19
USP42-202ENST00000404008 ILF2Q12905 390 aaKnown RBP28.74■■■□□ 2.19
USP42-202ENST00000404008 OTOAQ7RTW8 1153 aa28.74■■■□□ 2.19
USP42-202ENST00000404008 SFRP1Q8N474 314 aa28.74■■■□□ 2.19
USP42-202ENST00000404008 UHMK1Q8TAS1 419 aaKnown RBP28.74■■■□□ 2.19
USP42-202ENST00000404008 CNDP2Q96KP4 475 aaKnown RBP28.74■■■□□ 2.19
USP42-202ENST00000404008 RBBP8Q99708 897 aa28.74■■■□□ 2.19
USP42-202ENST00000404008 WWP1Q9H0M0 922 aa28.74■■■□□ 2.19
USP42-202ENST00000404008 OR52A5Q9H2C5 316 aa28.74■■■□□ 2.19
USP42-202ENST00000404008 SARS2Q9NP81 518 aaKnown RBP28.74■■■□□ 2.19
USP42-202ENST00000404008 CDYLQ9Y232 598 aa28.74■■■□□ 2.19
USP42-202ENST00000404008 GPC4O75487 556 aa28.73■■■□□ 2.19
USP42-202ENST00000404008 LDOC1O95751 146 aaPredicted RBP28.73■■■□□ 2.19
USP42-202ENST00000404008 APOA4P06727 396 aa28.73■■■□□ 2.19
USP42-202ENST00000404008 SLC35G4P0C7Q5 338 aa28.73■■■□□ 2.19
USP42-202ENST00000404008 PDHA2P29803 388 aa28.73■■■□□ 2.19
USP42-202ENST00000404008 TIAL1Q01085 375 aaKnown RBP eCLIP28.73■■■□□ 2.19
USP42-202ENST00000404008 PLOD1Q02809 727 aaPredicted RBP28.73■■■□□ 2.19
USP42-202ENST00000404008 HSPA14Q0VDF9 509 aa28.73■■■□□ 2.19
USP42-202ENST00000404008 SLC29A2Q14542 456 aa28.73■■■□□ 2.19
USP42-202ENST00000404008 CLCA4Q14CN2 919 aa28.73■■■□□ 2.19
USP42-202ENST00000404008 TMED2Q15363 201 aa28.73■■■□□ 2.19
USP42-202ENST00000404008 RSPO4Q2I0M5 234 aaPredicted RBP28.73■■■□□ 2.19
USP42-202ENST00000404008 KLHL38Q2WGJ6 581 aa28.73■■■□□ 2.19
USP42-202ENST00000404008 C14orf28Q4W4Y0 310 aa28.73■■■□□ 2.19
USP42-202ENST00000404008 GPATCH11Q8N954 259 aa28.73■■■□□ 2.19
USP42-202ENST00000404008 SLC37A2Q8TED4 501 aa28.73■■■□□ 2.19
USP42-202ENST00000404008 CAVIN3Q969G5 261 aa28.73■■■□□ 2.19
USP42-202ENST00000404008 TMEM159Q96B96 161 aa28.73■■■□□ 2.19
USP42-202ENST00000404008 VPS39Q96JC1 886 aa28.73■■■□□ 2.19
USP42-202ENST00000404008 CDC6Q99741 560 aa28.73■■■□□ 2.19
USP42-202ENST00000404008 KIR2DS5A0A0G2JLQ3 304 aa28.72■■■□□ 2.19
USP42-202ENST00000404008 A0A0G2JNG1 304 aa28.72■■■□□ 2.19
USP42-202ENST00000404008 OR5K4A6NMS3 321 aa28.72■■■□□ 2.19
USP42-202ENST00000404008 KIR2DS3K7RE56 304 aa28.72■■■□□ 2.19
USP42-202ENST00000404008 VPS26AO75436 327 aa28.72■■■□□ 2.19
USP42-202ENST00000404008 FAM155BO75949 473 aa28.72■■■□□ 2.19
USP42-202ENST00000404008 CKMT1AP12532 417 aa28.72■■■□□ 2.19
USP42-202ENST00000404008 MYF5P13349 255 aa28.72■■■□□ 2.19
USP42-202ENST00000404008 HALP42357 657 aa28.72■■■□□ 2.19
USP42-202ENST00000404008 CDKN2DP55273 166 aa28.72■■■□□ 2.19
USP42-202ENST00000404008 KIR2DS5Q14953 304 aa28.72■■■□□ 2.19
USP42-202ENST00000404008 NR0B2Q15466 257 aa28.72■■■□□ 2.19
USP42-202ENST00000404008 GRTP1Q5TC63 336 aa28.72■■■□□ 2.19
USP42-202ENST00000404008 HECTD2Q5U5R9 776 aa28.72■■■□□ 2.19
USP42-202ENST00000404008 FAM45BPQ6NSW5 357 aa28.72■■■□□ 2.19
USP42-202ENST00000404008 GIMAP7Q8NHV1 300 aa28.72■■■□□ 2.19
USP42-202ENST00000404008 FAM45AQ8TCE6 357 aa28.72■■■□□ 2.19
USP42-202ENST00000404008 RMDN2Q96LZ7 410 aa28.72■■■□□ 2.19
USP42-202ENST00000404008 KLHL42Q9P2K6 505 aa28.72■■■□□ 2.19
USP42-202ENST00000404008 FAM95CA0A1B0GW59 222 aa28.71■■■□□ 2.19
USP42-202ENST00000404008 SLCO2B1O94956 709 aa28.71■■■□□ 2.19
USP42-202ENST00000404008 CSRP1P21291 193 aaKnown RBP28.71■■■□□ 2.19
USP42-202ENST00000404008 SDHBP21912 280 aa28.71■■■□□ 2.19
USP42-202ENST00000404008 CD9P21926 228 aa28.71■■■□□ 2.19
USP42-202ENST00000404008 RPIAP49247 311 aa28.71■■■□□ 2.19
USP42-202ENST00000404008 MAZP56270 477 aaKnown RBP28.71■■■□□ 2.19
USP42-202ENST00000404008 PLEKHS1Q5SXH7 462 aa28.71■■■□□ 2.19
USP42-202ENST00000404008 CAPRIN2Q6IMN6 1127 aaKnown RBP28.71■■■□□ 2.19
USP42-202ENST00000404008 VRK3Q8IV63 474 aa28.71■■■□□ 2.19
USP42-202ENST00000404008 SLC22A15Q8IZD6 547 aa28.71■■■□□ 2.19
USP42-202ENST00000404008 ARL14Q8N4G2 192 aa28.71■■■□□ 2.19
USP42-202ENST00000404008 ZBTB2Q8N680 514 aa28.71■■■□□ 2.19
USP42-202ENST00000404008 SIDT2Q8NBJ9 832 aaKnown RBP28.71■■■□□ 2.19
USP42-202ENST00000404008 ACVR1CQ8NER5 493 aa28.71■■■□□ 2.19
USP42-202ENST00000404008 DEFB124Q8NES8 71 aa28.71■■■□□ 2.19
USP42-202ENST00000404008 SPDYE1Q8NFV5 336 aaPredicted RBP28.71■■■□□ 2.19
USP42-202ENST00000404008 MAPK15Q8TD08 544 aa28.71■■■□□ 2.19
USP42-202ENST00000404008 UBLCP1Q8WVY7 318 aaPredicted RBP28.71■■■□□ 2.19
USP42-202ENST00000404008 GPR21Q99679 349 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms