RNA–Protein interactions for RNA: ENST00000402697.5

PRAME-203, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-203ENST00000402697 LSM1O15116 133 aaKnown RBP12.82□□□□□ -0.36
PRAME-203ENST00000402697 SEC24AO95486 1093 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 TRBC1P01850 177 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 CAPN1P07384 714 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 EBLN1P0CF75 366 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 NCF1P14598 390 aaPredicted RBP12.82□□□□□ -0.36
PRAME-203ENST00000402697 CKMT2P17540 419 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 PFKLP17858 780 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 CDH2P19022 906 aaPredicted RBP12.82□□□□□ -0.36
PRAME-203ENST00000402697 PRDX3P30048 256 aaKnown RBP12.82□□□□□ -0.36
PRAME-203ENST00000402697 EPHB3P54753 998 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 ECT2LQ008S8 904 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 BCL2L1Q07817 233 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 EPS8Q12929 822 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 CDH18Q13634 790 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 PAGE3Q5JUK9 113 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 LETMD1Q6P1Q0 360 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 CNKSR3Q6P9H4 555 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 CYP20A1Q6UW02 462 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 IL27RAQ6UWB1 636 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 Q6ZNB5 142 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 SERPINA9Q86WD7 417 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 ERI1Q8IV48 349 aaKnown RBP12.82□□□□□ -0.36
PRAME-203ENST00000402697 KIAA2013Q8IYS2 634 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 CMTR2Q8IYT2 770 aaKnown RBP12.82□□□□□ -0.36
PRAME-203ENST00000402697 CPXM2Q8N436 756 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 DNAJB14Q8TBM8 379 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 NSMCE2Q96MF7 247 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 HERC2P3Q9BVR0 1158 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 CAAP1Q9H8G2 361 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 RSL24D1Q9UHA3 163 aaKnown RBP12.82□□□□□ -0.36
PRAME-203ENST00000402697 EGFL7Q9UHF1 273 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 LSM7Q9UK45 103 aaKnown RBP12.82□□□□□ -0.36
PRAME-203ENST00000402697 ATP11BQ9Y2G3 1177 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 A0A1W2PQ67 120 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 CCDC160A6NGH7 325 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 TSPAN3O60637 253 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 DEAF1O75398 565 aaPredicted RBP12.82□□□□□ -0.36
PRAME-203ENST00000402697 KATNA1O75449 491 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 OR6B1O95007 311 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 IL6P05231 212 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 AKT1P31749 480 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 CAPGP40121 348 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 SMAD3P84022 425 aaKnown RBP12.82□□□□□ -0.36
PRAME-203ENST00000402697 PLOD1Q02809 727 aaPredicted RBP12.82□□□□□ -0.36
PRAME-203ENST00000402697 NFATC2Q13469 925 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 GK3PQ14409 553 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 NR6A1Q15406 480 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 TTC33Q6PID6 262 aaPredicted RBP12.82□□□□□ -0.36
PRAME-203ENST00000402697 C16orf59Q7L2K0 433 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 LYSMD3Q7Z3D4 306 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 TRIM46Q7Z4K8 759 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 PATL1Q86TB9 770 aaKnown RBP12.82□□□□□ -0.36
PRAME-203ENST00000402697 TCEAL8Q8IYN2 117 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 TCAIMQ8N3R3 496 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 SFRP1Q8N474 314 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 FIBCD1Q8N539 461 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 DHRSXQ8N5I4 330 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 VPS33AQ96AX1 596 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 NMD3Q96D46 503 aaKnown RBP12.82□□□□□ -0.36
PRAME-203ENST00000402697 MPP4Q96JB8 637 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 CGREF1Q99674 301 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 CIPCQ9C0C6 399 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 ATP13A3Q9H7F0 1226 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 GORASP2Q9H8Y8 452 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 BPIFA1Q9NP55 256 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 SMPD3Q9NY59 655 aaPredicted RBP12.82□□□□□ -0.36
PRAME-203ENST00000402697 CEPT1Q9Y6K0 416 aa12.82□□□□□ -0.36
PRAME-203ENST00000402697 AGAP14A8MT82 685 aa12.81□□□□□ -0.36
PRAME-203ENST00000402697 OR7A17O14581 309 aa12.81□□□□□ -0.36
PRAME-203ENST00000402697 ACOX3O15254 700 aa12.81□□□□□ -0.36
PRAME-203ENST00000402697 PRSS23O95084 383 aa12.81□□□□□ -0.36
PRAME-203ENST00000402697 KCNH1O95259 989 aa12.81□□□□□ -0.36
PRAME-203ENST00000402697 PRAMEF1O95521 474 aa12.81□□□□□ -0.36
PRAME-203ENST00000402697 ASLP04424 464 aa12.81□□□□□ -0.36
PRAME-203ENST00000402697 ACRV1P26436 265 aa12.81□□□□□ -0.36
PRAME-203ENST00000402697 VARSP26640 1264 aaKnown RBP12.81□□□□□ -0.36
PRAME-203ENST00000402697 HNRNPFP52597 415 aaKnown RBP12.81□□□□□ -0.36
PRAME-203ENST00000402697 CREMQ03060 361 aa12.81□□□□□ -0.36
PRAME-203ENST00000402697 TRAF3Q13114 568 aa12.81□□□□□ -0.36
PRAME-203ENST00000402697 AP5B1Q2VPB7 878 aa12.81□□□□□ -0.36
PRAME-203ENST00000402697 TIGD2Q4W5G0 525 aa12.81□□□□□ -0.36
PRAME-203ENST00000402697 ABRAXAS1Q6UWZ7 409 aa12.81□□□□□ -0.36
PRAME-203ENST00000402697 DLEU7Q6UYE1 221 aa12.81□□□□□ -0.36
PRAME-203ENST00000402697 EPHX4Q8IUS5 362 aa12.81□□□□□ -0.36
PRAME-203ENST00000402697 SPNS2Q8IVW8 549 aa12.81□□□□□ -0.36
PRAME-203ENST00000402697 FAM47BQ8NA70 645 aa12.81□□□□□ -0.36
PRAME-203ENST00000402697 OR4F6Q8NGB9 312 aa12.81□□□□□ -0.36
PRAME-203ENST00000402697 BPIFB1Q8TDL5 484 aa12.81□□□□□ -0.36
PRAME-203ENST00000402697 CNDP2Q96KP4 475 aaKnown RBP12.81□□□□□ -0.36
PRAME-203ENST00000402697 TEX37Q96LM6 180 aa12.81□□□□□ -0.36
PRAME-203ENST00000402697 ACOX2Q99424 681 aa12.81□□□□□ -0.36
PRAME-203ENST00000402697 UGT2B28Q9BY64 529 aa12.81□□□□□ -0.36
PRAME-203ENST00000402697 CD244Q9BZW8 370 aa12.81□□□□□ -0.36
PRAME-203ENST00000402697 IPPKQ9H8X2 491 aa12.81□□□□□ -0.36
PRAME-203ENST00000402697 SARS2Q9NP81 518 aaKnown RBP12.81□□□□□ -0.36
PRAME-203ENST00000402697 PCDH10Q9P2E7 1040 aa12.81□□□□□ -0.36
PRAME-203ENST00000402697 OPTCQ9UBM4 332 aa12.81□□□□□ -0.36
PRAME-203ENST00000402697 PCDHGB4Q9UN71 923 aa12.81□□□□□ -0.36
PRAME-203ENST00000402697 ANGPTL3Q9Y5C1 460 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms