RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 TEAD2Q15562 447 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 TTC27Q6P3X3 843 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 GHDCQ8N2G8 530 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 SRFBP1Q8NEF9 429 aaKnown RBP10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 NPLOC4Q8TAT6 608 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 BPIFB1Q8TDL5 484 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 CLP1Q92989 425 aaKnown RBP10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 ASB2Q96Q27 587 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 TMEM134Q9H6X4 195 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 ENY2Q9NPA8 101 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 DZANK1Q9NVP4 752 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 ARMCX1Q9P291 453 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 GNG13Q9P2W3 67 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 GMPPBQ9Y5P6 360 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 FUT4P22083 530 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 ABCG1P45844 678 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 GCNT1Q02742 428 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 BLMHQ13867 455 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 PCID2Q5JVF3 399 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 CAND1Q86VP6 1230 aaKnown RBP10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 LIX1LQ8IVB5 337 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 FUBP3Q96I24 572 aaKnown RBP eCLIP10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 ZSWIM3Q96MP5 696 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 MRPL45Q9BRJ2 306 aaKnown RBP10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 SEZ6LQ9BYH1 1024 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 EHD1Q9H4M9 534 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 BLOC1S4Q9NUP1 217 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 ATPIF1Q9UII2 106 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 SSR3Q9UNL2 185 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 GPR34Q9UPC5 381 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 COMMD3-BMI1R4GMX3 469 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 REM1O75628 298 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 CSTBP04080 98 aaKnown RBP10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 ATP4AP20648 1035 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 RGS19P49795 217 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 PLP2Q04941 152 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 MSLNQ13421 630 aaPredicted RBP10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 RFX4Q33E94 735 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 VARS2Q5ST30 1063 aaKnown RBP10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 C9orf57Q5W0N0 161 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 ZNF730Q6ZMV8 503 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 TMPPEQ6ZT21 453 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 ARPINQ7Z6K5 226 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 OFCC1Q8IZS5 231 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 DCAKDQ8WVC6 231 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 MAFO75444 373 aaPredicted RBP10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 LAMP2P13473 410 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 SCGB2A2Q13296 93 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 RBM39Q14498 530 aaKnown RBP10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 AAGABQ6PD74 315 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 DNAJB7Q7Z6W7 309 aaPredicted RBP10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 OR52K1Q8NGK4 314 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 SLC22A17Q8WUG5 538 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 VAT1Q99536 393 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 ACO2Q99798 780 aaKnown RBP10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 HSD3B7Q9H2F3 369 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 THAP1Q9NVV9 213 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 PPP1R14DQ9NXH3 145 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 NCANO14594 1321 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 M0R036 132 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 SYN3O14994 580 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 FGF18O76093 207 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 GJB6O95452 261 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 LDOC1O95751 146 aaPredicted RBP10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 IFNA6P05013 189 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 TACR2P21452 398 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 GLRA2P23416 452 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 TNFSF9P41273 254 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 PRKCIP41743 596 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 VLDLRP98155 873 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 PSTKQ8IV42 348 aaKnown RBP10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 TOR1AIP2Q8NFQ8 470 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 ACSS2Q9NR19 701 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 GKN1Q9NS71 199 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 ERGIC3Q9Y282 383 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 TBC1D30Q9Y2I9 924 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 GRIP1Q9Y3R0 1128 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 B4GALT5O43286 388 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 GABBR2O75899 941 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 ASLP04424 464 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 ADSSP30520 456 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 CDKN1CP49918 316 aaPredicted RBP10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 SMIM11AP58511 58 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 GALK2Q01415 458 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 ATPAF1Q5TC12 328 aaPredicted RBP10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 CXorf57Q6NSI4 855 aaKnown RBP10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 NLGN4XQ8N0W4 816 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 MEIOBQ8N635 442 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 AMER2Q8N7J2 671 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 PHF10Q8WUB8 498 aaKnown RBP10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 PNPLA2Q96AD5 504 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 EBF3Q9H4W6 596 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 FBRSL1Q9HCM7 1045 aaKnown RBP10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 ABCB9Q9NP78 766 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 CCDC167Q9P0B6 97 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 CLUHO75153 1309 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 AGPSO00116 658 aa10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 DHX15O43143 795 aaKnown RBP10.84□□□□□ -0.67
CACNA1C-210ENST00000399606 UNC5CO95185 931 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms