RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 GCAP28676 217 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 CLCN7P51798 805 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 CDKN2DP55273 166 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 CLCA4Q14CN2 919 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 SUZ12Q15022 739 aaKnown RBP12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 BRD3Q15059 726 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 SEPT7Q16181 437 aaKnown RBP12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 RSPO4Q2I0M5 234 aaPredicted RBP12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 AGAP9Q5VTM2 703 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 ZCCHC8Q6NZY4 707 aaKnown RBP12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 IYDQ6PHW0 289 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 TRMT10CQ7L0Y3 403 aaKnown RBP12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 PIM3Q86V86 326 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 CFAP206Q8IYR0 622 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 SFRP1Q8N474 314 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 PPM1NQ8N819 430 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 ARL10Q8N8L6 244 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 DEFB124Q8NES8 71 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 SLC37A2Q8TED4 501 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 SETD7Q8WTS6 366 aaKnown RBP12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 ZDHHC1Q8WTX9 485 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 ELMO1Q92556 727 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 KCNJ9Q92806 393 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 ATXN7L3BQ96GX2 97 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 OLFM1Q99784 485 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 DUSP23Q9BVJ7 150 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 OR52A5Q9H2C5 316 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 DPEP2Q9H4A9 486 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 LATS2Q9NRM7 1088 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 ZNF624Q9P2J8 865 aaPredicted RBP12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 PSMD13Q9UNM6 376 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 DOLKQ9UPQ8 538 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 VPS9D1Q9Y2B5 631 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 COL27A1Q8IZC6 1860 aaPredicted RBP12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 TRBV23OR9-2A0A075B6M9 112 aa12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 HMX2A2RU54 273 aa12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 KLHL33A6NCF5 533 aa12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 OR52A4PA6NMU1 304 aa12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 H3BMM5 538 aa12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 GIPC1O14908 333 aa12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 LIN7AO14910 233 aaPredicted RBP12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 PFDN6O15212 129 aa12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 GSTM1P09488 218 aa12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 ALPPL2P10696 532 aa12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 IDSP22304 550 aa12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 GP5P40197 560 aa12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 SLC19A1P41440 591 aa12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 CSE1LP55060 971 aaKnown RBP12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 UBE2IP63279 158 aaKnown RBP12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 GSTM4Q03013 218 aa12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 DNAJC3Q13217 504 aa12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 BOP1Q14137 746 aaKnown RBP12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 C14orf28Q4W4Y0 310 aa12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 HECTD2Q5U5R9 776 aa12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 CAPRIN2Q6IMN6 1127 aaKnown RBP12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 DUS1LQ6P1R4 473 aaKnown RBP12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 GUSBP11Q6P575 273 aa12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 CTAGE3PQ8IX95 158 aa12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 SIDT2Q8NBJ9 832 aaKnown RBP12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 CD200R1Q8TD46 325 aa12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 RHBDD1Q8TEB9 315 aa12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 CAVIN3Q969G5 261 aa12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 CNDP2Q96KP4 475 aaKnown RBP12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 RBBP8Q99708 897 aa12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 WWP1Q9H0M0 922 aa12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 RHOJQ9H4E5 214 aa12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 TOR4AQ9NXH8 423 aa12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 MTO1Q9Y2Z2 717 aaKnown RBP12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 ASXL3Q9C0F0 2248 aa12.15□□□□□ -0.46
HLA-DQB1-203ENST00000399082 EME2A4GXA9 379 aaPredicted RBP12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 PDZK1P1A8MUH7 402 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 SLCO2B1O94956 709 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 WISP3O95389 354 aaPredicted RBP12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 LDOC1O95751 146 aaPredicted RBP12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CKMT1AP12532 417 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 VCLP18206 1134 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CSRP1P21291 193 aaKnown RBP12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 FDXRP22570 491 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 ACADLP28330 430 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 PHBP35232 272 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 LIMK2P53671 638 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 RPA4Q13156 261 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 NAB1Q13506 487 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 SLC29A2Q14542 456 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 RPE65Q16518 533 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 INAVAQ3KP66 663 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 ACSBG2Q5FVE4 666 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 PERM1Q5SV97 790 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 TMEM207Q6UWW9 146 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 SLC22A15Q8IZD6 547 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 ARL14Q8N4G2 192 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 GPATCH11Q8N954 259 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 GABPB2Q8TAK5 448 aaPredicted RBP12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 SLC44A1Q8WWI5 657 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CDKL2Q92772 493 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 GLMNQ92990 594 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 VPS39Q96JC1 886 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 PANX3Q96QZ0 392 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 INSM2Q96T92 566 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms