RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 UBA6A0AVT1 1052 aaPredicted RBP11.73□□□□□ -0.53
TFF3-202ENST00000398431 OR6C74A6NCV1 312 aa11.73□□□□□ -0.53
TFF3-202ENST00000398431 MGAT4DA6NG13 374 aa11.73□□□□□ -0.53
TFF3-202ENST00000398431 DDX3YO15523 660 aaKnown RBP11.73□□□□□ -0.53
TFF3-202ENST00000398431 SCRG1O75711 98 aa11.73□□□□□ -0.53
TFF3-202ENST00000398431 KRT1P04264 644 aa11.73□□□□□ -0.53
TFF3-202ENST00000398431 PTGIRP43119 386 aa11.73□□□□□ -0.53
TFF3-202ENST00000398431 NR2C2P49116 596 aa11.73□□□□□ -0.53
TFF3-202ENST00000398431 DNTTIP2Q5QJE6 756 aaKnown RBP11.73□□□□□ -0.53
TFF3-202ENST00000398431 FNBP1LQ5T0N5 605 aa11.73□□□□□ -0.53
TFF3-202ENST00000398431 FHL5Q5TD97 284 aa11.73□□□□□ -0.53
TFF3-202ENST00000398431 ZNF567Q8N184 647 aa11.73□□□□□ -0.53
TFF3-202ENST00000398431 LILRA3Q8N6C8 439 aaPredicted RBP11.73□□□□□ -0.53
TFF3-202ENST00000398431 Q8NA96 180 aa11.73□□□□□ -0.53
TFF3-202ENST00000398431 OR8K1Q8NGG5 319 aa11.73□□□□□ -0.53
TFF3-202ENST00000398431 ZNF398Q8TD17 642 aa11.73□□□□□ -0.53
TFF3-202ENST00000398431 TFB1MQ8WVM0 346 aaKnown RBP11.73□□□□□ -0.53
TFF3-202ENST00000398431 MR1Q95460 341 aa11.73□□□□□ -0.53
TFF3-202ENST00000398431 LRFN5Q96NI6 719 aa11.73□□□□□ -0.53
TFF3-202ENST00000398431 DNAJC7Q99615 494 aa11.73□□□□□ -0.53
TFF3-202ENST00000398431 NRTNQ99748 197 aa11.73□□□□□ -0.53
TFF3-202ENST00000398431 IMP3Q9NV31 184 aaKnown RBP11.73□□□□□ -0.53
TFF3-202ENST00000398431 SMOXQ9NWM0 555 aa11.73□□□□□ -0.53
TFF3-202ENST00000398431 HACD3Q9P035 362 aa11.73□□□□□ -0.53
TFF3-202ENST00000398431 PLEKHB1Q9UF11 243 aaPredicted RBP11.73□□□□□ -0.53
TFF3-202ENST00000398431 BTRCQ9Y297 605 aa11.73□□□□□ -0.53
TFF3-202ENST00000398431 NBPF19A0A087WUL8 3843 aa11.73□□□□□ -0.53
TFF3-202ENST00000398431 NOTCH2Q04721 2471 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 CACNA1DQ01668 2161 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 F5H423 210 aaPredicted RBP11.72□□□□□ -0.53
TFF3-202ENST00000398431 MEN1O00255 615 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 CST8O60676 142 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 CPNE3O75131 537 aaKnown RBP11.72□□□□□ -0.53
TFF3-202ENST00000398431 AGFG2O95081 481 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 LCA5LO95447 670 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 ZBTB11O95625 1053 aaPredicted RBP11.72□□□□□ -0.53
TFF3-202ENST00000398431 RAB40ALP0C0E4 278 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 PBLDP30039 288 aaPredicted RBP11.72□□□□□ -0.53
TFF3-202ENST00000398431 RORAP35398 523 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 ARCN1P48444 511 aaKnown RBP11.72□□□□□ -0.53
TFF3-202ENST00000398431 ARL4DP49703 201 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 PGDP52209 483 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 ITGA1P56199 1179 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 MSLNQ13421 630 aaPredicted RBP11.72□□□□□ -0.53
TFF3-202ENST00000398431 XRCC4Q13426 336 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 PLCL1Q15111 1095 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 TCEAL1Q15170 157 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 INPP5JQ15735 1006 aaPredicted RBP11.72□□□□□ -0.53
TFF3-202ENST00000398431 PPP2R5EQ16537 467 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 PRR30Q53SZ7 412 aaPredicted RBP11.72□□□□□ -0.53
TFF3-202ENST00000398431 ZNF789Q5FWF6 425 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 DET1Q7L5Y6 550 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 PID1Q7Z2X4 250 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 OOSP2Q86WS3 158 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 TMEM126BQ8IUX1 230 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 DSELQ8IZU8 1212 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 EFCAB3Q8N7B9 438 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 FDCSPQ8NFU4 85 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 OR2L2Q8NH16 312 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 OR8K5Q8NH50 307 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 BLOC1S5Q8TDH9 187 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 C12orf66Q96MD2 445 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 GORASP1Q9BQQ3 440 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 ZCCHC2Q9C0B9 1178 aaKnown RBP11.72□□□□□ -0.53
TFF3-202ENST00000398431 KIR3DX1Q9H7L2 352 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 ACSS2Q9NR19 701 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 LATS2Q9NRM7 1088 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 DDX56Q9NY93 547 aaKnown RBP11.72□□□□□ -0.53
TFF3-202ENST00000398431 ACSL5Q9ULC5 683 aa11.72□□□□□ -0.53
TFF3-202ENST00000398431 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.72□□□□□ -0.53
TFF3-202ENST00000398431 CCDC88CQ9P219 2028 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 SLC9B1P1A6NJY1 282 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 AGAP14A8MT82 685 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 TCP11X1B4DZS4 312 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 CBFA2T2O43439 604 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 AKR1B10O60218 316 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 AGTP01019 485 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 KLK3P07288 261 aaPredicted RBP11.71□□□□□ -0.53
TFF3-202ENST00000398431 TNNT1P13805 278 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 POLR2CP19387 275 aaPredicted RBP11.71□□□□□ -0.53
TFF3-202ENST00000398431 HLA-DPA1P20036 260 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 COMTP21964 271 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 ZNF75DP51815 510 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 XIAPP98170 497 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 PDE1BQ01064 536 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 ABRQ12979 859 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 ITGA9Q13797 1035 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 LONRF2Q1L5Z9 754 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 JMJD6Q6NYC1 403 aaPredicted RBP11.71□□□□□ -0.53
TFF3-202ENST00000398431 BZW1Q7L1Q6 419 aaKnown RBP11.71□□□□□ -0.53
TFF3-202ENST00000398431 GLT6D1Q7Z4J2 308 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 ZC3H18Q86VM9 953 aaKnown RBP11.71□□□□□ -0.53
TFF3-202ENST00000398431 CARFQ8N187 725 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 ZBTB2Q8N680 514 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 RBMXL3Q8N7X1 1067 aaKnown RBP11.71□□□□□ -0.53
TFF3-202ENST00000398431 ENDOVQ8N8Q3 282 aaKnown RBP11.71□□□□□ -0.53
TFF3-202ENST00000398431 IPMKQ8NFU5 416 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 OR4E2Q8NGC2 313 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 OR1L3Q8NH93 324 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 SSC4DQ8WTU2 575 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms