RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 FCRL2Q96LA5 508 aaPredicted RBP19.44■□□□□ 0.7
SHANK1-203ENST00000391813 C2orf49Q9BVC5 232 aaPredicted RBP19.44■□□□□ 0.7
SHANK1-203ENST00000391813 ITPAQ9BY32 194 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 IGLV3-22A0A075B6J6 115 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 IFNW1P05000 195 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 OGNP20774 298 aaKnown RBP19.44■□□□□ 0.7
SHANK1-203ENST00000391813 IMPDH1P20839 514 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 RHAGQ02094 409 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 HECTD3Q5T447 861 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 STYXQ8WUJ0 223 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 SLC9A7Q96T83 725 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 CNPPD1Q9BV87 410 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 KCNN2Q9H2S1 579 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 MMP27Q9H306 513 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 CNOT11Q9UKZ1 510 aaKnown RBP19.44■□□□□ 0.7
SHANK1-203ENST00000391813 PADI3Q9ULW8 664 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 DHRS7Q9Y394 339 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 NPEPPSL1A6NEC2 478 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 H3BNH8 94 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 TRBC1P01850 177 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 SLC6A4P31645 630 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 ABL2P42684 1182 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 GLUD2P49448 558 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 CYP4F8P98187 520 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 CCDC28AQ8IWP9 274 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 MIPEPQ99797 713 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 KCNS3Q9BQ31 491 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 RAD18Q9NS91 495 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 GULP1Q9UBP9 304 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 MRPS23Q9Y3D9 190 aaKnown RBP19.44■□□□□ 0.7
SHANK1-203ENST00000391813 A0A088AWK7 358 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 TRAV19A0A0A6YYK7 116 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 UGT2B17O75795 530 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 CHRM1P11229 460 aaPredicted RBP19.43■□□□□ 0.7
SHANK1-203ENST00000391813 COL6A1P12109 1028 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 ASCC1Q8N9N2 400 aaKnown RBP19.43■□□□□ 0.7
SHANK1-203ENST00000391813 TMBIM1Q969X1 311 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 PPCDCQ96CD2 204 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 SLC45A3Q96JT2 553 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 APOLD1Q96LR9 279 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 ZNF358Q9NW07 568 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 H0YAE9 185 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 FGF19O95750 216 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 MYBPC3Q14896 1274 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 DPYSL2Q16555 572 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 OGFRL1Q5TC84 451 aaPredicted RBP19.43■□□□□ 0.7
SHANK1-203ENST00000391813 ESRP1Q6NXG1 681 aaKnown RBP19.43■□□□□ 0.7
SHANK1-203ENST00000391813 CERS6Q6ZMG9 384 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 DEF8Q6ZN54 512 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 OTOP3Q7RTS5 596 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 NETO2Q8NC67 525 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 SPPL2BQ8TCT7 592 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 GATA6Q92908 595 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 IPPKQ9H8X2 491 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 APOBEC3GQ9HC16 384 aaKnown RBP19.43■□□□□ 0.7
SHANK1-203ENST00000391813 ACADMP11310 421 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 MC4RP32245 332 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 CDH4P55283 916 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 MTAPQ13126 283 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 SPRED3Q2MJR0 410 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 AZIN2Q96A70 460 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 MNTQ99583 582 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 COL1A1P02452 1464 aaPredicted RBP19.43■□□□□ 0.7
SHANK1-203ENST00000391813 TREHO43280 583 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 OAS1P00973 400 aaKnown RBP19.43■□□□□ 0.7
SHANK1-203ENST00000391813 PIRTP0C851 137 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 MTHFD1P11586 935 aaKnown RBP19.43■□□□□ 0.7
SHANK1-203ENST00000391813 CD72P21854 359 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 OMPP47874 163 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 GSK3BP49841 420 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 ZNF45Q02386 682 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 SYT16Q17RD7 645 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 RAP1GAP2Q684P5 730 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 CYP20A1Q6UW02 462 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 DET1Q7L5Y6 550 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 ZNF655Q8N720 491 aaPredicted RBP19.43■□□□□ 0.7
SHANK1-203ENST00000391813 BSNDQ8WZ55 320 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 CLP1Q92989 425 aaKnown RBP19.43■□□□□ 0.7
SHANK1-203ENST00000391813 SLC25A51Q9H1U9 297 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 SMPD4Q9NXE4 827 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 ADAMTS6Q9UKP5 1117 aa19.43■□□□□ 0.7
SHANK1-203ENST00000391813 FPGTO14772 594 aa19.42■□□□□ 0.7
SHANK1-203ENST00000391813 STK16O75716 305 aa19.42■□□□□ 0.7
SHANK1-203ENST00000391813 INMTO95050 263 aa19.42■□□□□ 0.7
SHANK1-203ENST00000391813 PEPDP12955 493 aa19.42■□□□□ 0.7
SHANK1-203ENST00000391813 TSTD2Q5T7W7 516 aa19.42■□□□□ 0.7
SHANK1-203ENST00000391813 ZC3H3Q8IXZ2 948 aaKnown RBP19.42■□□□□ 0.7
SHANK1-203ENST00000391813 CLHC1Q8NHS4 586 aa19.42■□□□□ 0.7
SHANK1-203ENST00000391813 MKS1Q9NXB0 559 aa19.42■□□□□ 0.7
SHANK1-203ENST00000391813 DYRK3O43781 588 aa19.42■□□□□ 0.7
SHANK1-203ENST00000391813 AQP1P29972 269 aa19.42■□□□□ 0.7
SHANK1-203ENST00000391813 L1CAMP32004 1257 aa19.42■□□□□ 0.7
SHANK1-203ENST00000391813 EIF2B5Q13144 721 aaKnown RBP19.42■□□□□ 0.7
SHANK1-203ENST00000391813 SNAPC1Q16533 368 aa19.42■□□□□ 0.7
SHANK1-203ENST00000391813 AKIRIN2Q53H80 203 aa19.42■□□□□ 0.7
SHANK1-203ENST00000391813 OR4A15Q8NGL6 344 aa19.42■□□□□ 0.7
SHANK1-203ENST00000391813 HDAC2Q92769 488 aaKnown RBP19.42■□□□□ 0.7
SHANK1-203ENST00000391813 TTPALQ9BTX7 342 aa19.42■□□□□ 0.7
SHANK1-203ENST00000391813 AASSQ9UDR5 926 aa19.42■□□□□ 0.7
SHANK1-203ENST00000391813 ZNF536O15090 1300 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms