RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 RFTN2Q52LD8 501 aaPredicted RBP16.07■□□□□ 0.16
VPS16-203ENST00000380469 KLHL35Q6PF15 583 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 LINGO4Q6UY18 593 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 CERS6Q6ZMG9 384 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 STK32CQ86UX6 486 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 SDCCAG3Q96C92 435 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 MUS81Q96NY9 551 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 CLPBQ9H078 707 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 ANGPTL3Q9Y5C1 460 aa16.07■□□□□ 0.16
VPS16-203ENST00000380469 A0A0U1RQS6 177 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 ANKRD28O15084 1053 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 COCHO43405 550 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 RGS14O43566 566 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 KLKB1P03952 638 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 THRBP10828 461 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 MTHFRP42898 656 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 YAP1P46937 504 aaKnown RBP16.06■□□□□ 0.16
VPS16-203ENST00000380469 ENTPD1P49961 510 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 ARF5P84085 180 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 PLIN5Q00G26 463 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 MYBPC3Q14896 1274 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 ADGRF1Q5T601 910 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 SBSNQ6UWP8 590 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 UPF1Q92900 1129 aaKnown RBP eCLIP16.06■□□□□ 0.16
VPS16-203ENST00000380469 ABTB1Q969K4 478 aaPredicted RBP16.06■□□□□ 0.16
VPS16-203ENST00000380469 GKN1Q9NS71 199 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 IL17CQ9P0M4 197 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 ZNHIT2Q9UHR6 403 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 ZNF711Q9Y462 761 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 PCDHB9Q9Y5E1 797 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 ZNF840PA6NDX5 716 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 STC2O76061 302 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 PRSS23O95084 383 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 PCNAP12004 261 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 ZNF7P17097 686 aaPredicted RBP16.06■□□□□ 0.16
VPS16-203ENST00000380469 AKT1P31749 480 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 RGS4P49798 205 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 MAD2L1Q13257 205 aaPredicted RBP16.06■□□□□ 0.16
VPS16-203ENST00000380469 C16orf72Q14CZ0 275 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 TBC1D25Q3MII6 688 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 ZNF773Q6PK81 442 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 TMEM26Q6ZUK4 368 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 ZDHHC13Q8IUH4 622 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 OR2T12Q8NG77 320 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 FNDC8Q8TC99 324 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 OVCA2Q8WZ82 227 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 FIG4Q92562 907 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 CNDP2Q96KP4 475 aaKnown RBP16.06■□□□□ 0.16
VPS16-203ENST00000380469 ZNF583Q96ND8 569 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 TTPALQ9BTX7 342 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 THUMPD3Q9BV44 507 aaKnown RBP16.06■□□□□ 0.16
VPS16-203ENST00000380469 CWH43Q9H720 699 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 GORASP2Q9H8Y8 452 aa16.06■□□□□ 0.16
VPS16-203ENST00000380469 NT5C1B-RDH14C9J2C7 533 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 UPK1AO00322 258 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 GPR39O43194 453 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 RSL1D1O76021 490 aaKnown RBP16.05■□□□□ 0.16
VPS16-203ENST00000380469 GUCA1CO95843 209 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 ALPLP05186 524 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 IRF1P10914 325 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 GATMP50440 423 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 RPL38P63173 70 aaKnown RBP16.05■□□□□ 0.16
VPS16-203ENST00000380469 TRAF3Q13114 568 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 PRSS55Q6UWB4 352 aaPredicted RBP16.05■□□□□ 0.16
VPS16-203ENST00000380469 PDPRQ8NCN5 879 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 TTC16Q8NEE8 873 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 SLC13A3Q8WWT9 602 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 HSPBAP1Q96EW2 488 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 GLT1D1Q96MS3 346 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 CCDC115Q96NT0 180 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 CASD1Q96PB1 797 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 FAM126AQ9BYI3 521 aaPredicted RBP16.05■□□□□ 0.16
VPS16-203ENST00000380469 CIPCQ9C0C6 399 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 NSUN3Q9H649 340 aaKnown RBP16.05■□□□□ 0.16
VPS16-203ENST00000380469 TMEM9Q9P0T7 183 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.05■□□□□ 0.16
VPS16-203ENST00000380469 G3V2T6 193 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 H0Y858 1186 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 SLC28A1O00337 649 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 GLUD1P00367 558 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 HPRP00739 348 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 ELK4P28324 431 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 HMGCLP35914 325 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 HSPA7P48741 367 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 TUFMP49411 452 aaKnown RBP16.05■□□□□ 0.16
VPS16-203ENST00000380469 RHOAP61586 193 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 SREBF2Q12772 1141 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 BROXQ5VW32 411 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 CXorf57Q6NSI4 855 aaKnown RBP16.05■□□□□ 0.16
VPS16-203ENST00000380469 FKBP9P1Q75LS8 142 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 CHST15Q7LFX5 561 aaPredicted RBP16.05■□□□□ 0.16
VPS16-203ENST00000380469 ITIH5Q86UX2 942 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 CARNMT1Q8N4J0 409 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 NUDT8Q8WV74 236 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 NRBF2Q96F24 287 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 AURKBQ96GD4 344 aaPredicted RBP16.05■□□□□ 0.16
VPS16-203ENST00000380469 EGFL8Q99944 293 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 SH3GL1Q99961 368 aa16.05■□□□□ 0.16
VPS16-203ENST00000380469 ELAC1Q9H777 363 aaKnown RBP16.05■□□□□ 0.16
VPS16-203ENST00000380469 MAGEE1Q9HCI5 957 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms