RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 NCLNQ969V3 563 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 IMP4Q96G21 291 aaKnown RBP12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 TSGA13Q96PP4 275 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 UHRF1Q96T88 793 aaPredicted RBP12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 ALOXE3Q9BYJ1 711 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 VPS4AQ9UN37 437 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 UNC80Q8N2C7 3258 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 NADKO95544 446 aaPredicted RBP12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 CPNE6O95741 557 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 ALBP02768 609 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 MMP2P08253 660 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 CAPGP40121 348 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 DNAJB13P59910 316 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 TWF1Q12792 350 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 NR6A1Q15406 480 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 SMU1Q2TAY7 513 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 FAM214AQ32MH5 1076 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 GTF2IRD2BQ6EKJ0 949 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 ZNF773Q6PK81 442 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 SYVN1Q86TM6 617 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 GTF2IRD2Q86UP8 949 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 GATAD2AQ86YP4 633 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 PIANPQ8IYJ0 282 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 ADGRG5Q8IZF4 528 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 EEF1AKMT1Q8WVE0 214 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 NRBF2Q96F24 287 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 AURKBQ96GD4 344 aaPredicted RBP12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 SEZ6LQ9BYH1 1024 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 ZYG11BQ9C0D3 744 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 MRPL40Q9NQ50 206 aaKnown RBP12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 CCM2LQ9NUG4 571 aaPredicted RBP12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 DDX28Q9NUL7 540 aaKnown RBP12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 RGS13O14921 159 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 TLR5O60602 858 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 LDLRP01130 860 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 CYBBP04839 570 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 SPNP16150 400 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 CTPS1P17812 591 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 RPS9P46781 194 aaKnown RBP12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 CPT1AP50416 773 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 TAF10Q12962 218 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 XKR4Q5GH76 650 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 CATSPEREQ5SY80 951 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 GLYATQ6IB77 296 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 GET4Q7L5D6 327 aaPredicted RBP12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 SLC22A15Q8IZD6 547 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 SPERTQ8NA61 448 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 OR2T11Q8NH01 316 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 NDNFQ8TB73 568 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 METTL6Q8TCB7 284 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 HCAR2Q8TDS4 363 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 TP53INP1Q96A56 240 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 BIRC7Q96CA5 298 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 PGAP3Q96FM1 320 aaPredicted RBP12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 ACBD6Q9BR61 282 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 MAGEE1Q9HCI5 957 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 PRDM8Q9NQV8 689 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 MARCH2Q9P0N8 246 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 ANAPC2Q9UJX6 822 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 A8MV72 311 aaPredicted RBP12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 FGF10O15520 208 aaPredicted RBP12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 KCNK2O95069 426 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 CYP4B1P13584 511 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 DDX5P17844 614 aaKnown RBP12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 EFNA1P20827 205 aaPredicted RBP12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 CCNYL2Q5T2Q4 361 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 PSAPL1Q6NUJ1 521 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 LRRC49Q8IUZ0 686 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 FAM126BQ8IXS8 530 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 CLDN19Q8N6F1 224 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 CDKN2AIPNLQ96HQ2 116 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 TUBA1CQ9BQE3 449 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 SMPD4Q9NXE4 827 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 SMPD3Q9NY59 655 aaPredicted RBP12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 FKBPLQ9UIM3 349 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 C5orf42Q9H799 3197 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 GSTA4O15217 222 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 RFPL2O75678 378 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 TCF3P15923 654 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 SHMT2P34897 504 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 CSRP3P50461 194 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 HMGCS1Q01581 520 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 PTGR1Q14914 329 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 TAF1CQ15572 869 aaPredicted RBP12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 ATP6AP1LQ52LC2 224 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 BROXQ5VW32 411 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 FAM45BPQ6NSW5 357 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 LYPD8Q6UX82 237 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 PRR23CQ6ZRP0 262 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 SLC16A12Q6ZSM3 486 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 LIMS2Q7Z4I7 341 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 GLT6D1Q7Z4J2 308 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 GALNT10Q86SR1 603 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 ANKRD46Q86W74 232 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 SCML4Q8N228 414 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 SDR16C5Q8N3Y7 309 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 MFSD4AQ8N468 514 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 BEND7Q8N7W2 519 aaPredicted RBP12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 POC5Q8NA72 575 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 FAM45AQ8TCE6 357 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms