RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 ANKRD13BQ86YJ7 626 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 LINGO1Q96FE5 620 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 RAB11FIP5Q9BXF6 653 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 ARMC1Q9NVT9 282 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 EGFL7Q9UHF1 273 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 BHMG1C9JSJ3 638 aaPredicted RBP10.06□□□□□ -0.8
PTCH1-204ENST00000375290 TBX1O43435 398 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 ETV6P41212 452 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 NSG1P42857 185 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 TTLL2Q9BWV7 592 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 CNOT6Q9ULM6 557 aaKnown RBP10.06□□□□□ -0.8
PTCH1-204ENST00000375290 ATG13O75143 517 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 AP2A2O94973 939 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 MAP3K6O95382 1288 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 KCNJ11Q14654 390 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 HLA-DQA1Q5Y7H0 255 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 LRRC70Q7Z2Q7 622 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 POMGNT2Q8NAT1 580 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 FCRL5Q96RD9 977 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 TRPV2Q9Y5S1 764 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 C4BPAP04003 597 aaKnown RBP10.06□□□□□ -0.8
PTCH1-204ENST00000375290 ALDH2P05091 517 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 CD97P48960 835 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 PTPN20Q4JDL3 420 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 FAM35AQ86V20 835 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 GALNT12Q8IXK2 581 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 KREMEN1Q96MU8 473 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 FAM120CQ9NX05 1096 aaKnown RBP10.06□□□□□ -0.8
PTCH1-204ENST00000375290 ZNF780BQ9Y6R6 833 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 M0R233 179 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 TPH1P17752 444 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 S100A12P80511 92 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 PTGR1Q14914 329 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 DNAJA4Q8WW22 397 aaPredicted RBP10.06□□□□□ -0.8
PTCH1-204ENST00000375290 ELMO3Q96BJ8 720 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 POLR3HQ9Y535 204 aaPredicted RBP10.06□□□□□ -0.8
PTCH1-204ENST00000375290 LRRC37A3O60309 1634 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 OR6C75A6NL08 312 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 CENPAP49450 140 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 CTBP2P56545 445 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 SH3D19Q5HYK7 790 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 ATXN7L2Q5T6C5 722 aaPredicted RBP10.06□□□□□ -0.8
PTCH1-204ENST00000375290 PIGZQ86VD9 579 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 UXS1Q8NBZ7 420 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 ZNF548Q8NEK5 533 aaPredicted RBP10.06□□□□□ -0.8
PTCH1-204ENST00000375290 KCTD13Q8WZ19 329 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 A0A1B0GVI7 797 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 EI24O14681 340 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 RP2O75695 350 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 INMTO95050 263 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 OR5F1O95221 314 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 SLC13A2Q13183 592 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 MINDY1Q8N5J2 469 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 ANKRD60Q9BZ19 345 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 CST11Q9H112 138 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 MAGEH1Q9H213 219 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 LINC00032P0C843 101 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 MAPK10P53779 464 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 MYBPC1Q00872 1141 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 TAF1AQ15573 450 aaPredicted RBP10.05□□□□□ -0.8
PTCH1-204ENST00000375290 GNASQ5JWF2 1037 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 GK5Q6ZS86 529 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 AKAP1Q92667 903 aaKnown RBP eCLIP10.05□□□□□ -0.8
PTCH1-204ENST00000375290 SEMA4DQ92854 862 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 SPATA7Q9P0W8 599 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 EPOP01588 193 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 CD247P20963 164 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 WNT3AP56704 352 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 LGMNQ99538 433 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 GPR22Q99680 433 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 PSKH1P11801 424 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 MBLAC2Q68D91 279 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 TM9SF2Q99805 663 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 AIF1LQ9BQI0 150 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 IRF2BPLQ9H1B7 796 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 CCM2LQ9NUG4 571 aaPredicted RBP10.05□□□□□ -0.8
PTCH1-204ENST00000375290 A0A0U1RQJ8 604 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 ZMPSTE24O75844 475 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 RAB36O95755 333 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 CKBP12277 381 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 BMP2P12643 396 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 CLCN4P51793 760 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 RHEBL1Q8TAI7 183 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 TM9SF3Q9HD45 589 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 SYNDIG1LA6NDD5 238 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 PRAMEF12O95522 483 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 ANXA3P12429 323 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 MPSTP25325 297 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 RBBP4Q09028 425 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 WSCD2Q2TBF2 565 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 KLHL35Q6PF15 583 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 ZBED6CLQ96FA7 236 aaPredicted RBP10.05□□□□□ -0.8
PTCH1-204ENST00000375290 FARSBQ9NSD9 589 aaKnown RBP10.05□□□□□ -0.8
PTCH1-204ENST00000375290 OAZ3Q9UMX2 235 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 NCKAP1Q9Y2A7 1128 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 TRIM64CA6NLI5 447 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 LRRTM2O43300 516 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 CNTN5O94779 1100 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 PPP5CP53041 499 aa10.05□□□□□ -0.8
PTCH1-204ENST00000375290 EIF4HQ15056 248 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms