RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 MMP20O60882 483 aa16.58■□□□□ 0.25
PTPN20-203ENST00000374342 GPC4O75487 556 aa16.58■□□□□ 0.25
PTPN20-203ENST00000374342 RECQL5O94762 991 aaPredicted RBP16.58■□□□□ 0.25
PTPN20-203ENST00000374342 OR4F21O95013 312 aa16.58■□□□□ 0.25
PTPN20-203ENST00000374342 LINC00032P0C843 101 aa16.58■□□□□ 0.25
PTPN20-203ENST00000374342 THRAP10827 490 aa16.58■□□□□ 0.25
PTPN20-203ENST00000374342 P2RY2P41231 377 aa16.58■□□□□ 0.25
PTPN20-203ENST00000374342 GTF2H2Q13888 395 aa16.58■□□□□ 0.25
PTPN20-203ENST00000374342 SQLEQ14534 574 aa16.58■□□□□ 0.25
PTPN20-203ENST00000374342 PLEKHS1Q5SXH7 462 aa16.58■□□□□ 0.25
PTPN20-203ENST00000374342 GTF2H2CQ6P1K8 395 aa16.58■□□□□ 0.25
PTPN20-203ENST00000374342 NUDT18Q6ZVK8 323 aa16.58■□□□□ 0.25
PTPN20-203ENST00000374342 CHSY3Q70JA7 882 aa16.58■□□□□ 0.25
PTPN20-203ENST00000374342 LARP4Q71RC2 724 aaKnown RBP eCLIP16.58■□□□□ 0.25
PTPN20-203ENST00000374342 CHPFQ8IZ52 775 aa16.58■□□□□ 0.25
PTPN20-203ENST00000374342 CLPTM1LQ96KA5 538 aa16.58■□□□□ 0.25
PTPN20-203ENST00000374342 CDK15Q96Q40 435 aa16.58■□□□□ 0.25
PTPN20-203ENST00000374342 RTKNQ9BST9 563 aa16.58■□□□□ 0.25
PTPN20-203ENST00000374342 THTPAQ9BU02 230 aa16.58■□□□□ 0.25
PTPN20-203ENST00000374342 NUSAP1Q9BXS6 441 aaKnown RBP16.58■□□□□ 0.25
PTPN20-203ENST00000374342 TUBB1Q9H4B7 451 aa16.58■□□□□ 0.25
PTPN20-203ENST00000374342 DENND2DQ9H6A0 471 aaPredicted RBP16.58■□□□□ 0.25
PTPN20-203ENST00000374342 NOL11Q9H8H0 719 aaKnown RBP16.58■□□□□ 0.25
PTPN20-203ENST00000374342 GIMAP2Q9UG22 337 aa16.58■□□□□ 0.25
PTPN20-203ENST00000374342 ZNF225Q9UK10 706 aa16.58■□□□□ 0.25
PTPN20-203ENST00000374342 PTBP2Q9UKA9 531 aaKnown RBP16.58■□□□□ 0.25
PTPN20-203ENST00000374342 STON1Q9Y6Q2 735 aa16.58■□□□□ 0.25
PTPN20-203ENST00000374342 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.58■□□□□ 0.25
PTPN20-203ENST00000374342 NUAK1O60285 661 aa16.58■□□□□ 0.24
PTPN20-203ENST00000374342 WFS1O76024 890 aa16.58■□□□□ 0.24
PTPN20-203ENST00000374342 CHEK2O96017 543 aa16.58■□□□□ 0.24
PTPN20-203ENST00000374342 UROSP10746 265 aa16.58■□□□□ 0.24
PTPN20-203ENST00000374342 ITGAXP20702 1163 aa16.58■□□□□ 0.24
PTPN20-203ENST00000374342 ADSLP30566 484 aaPredicted RBP16.58■□□□□ 0.24
PTPN20-203ENST00000374342 NUDT2P50583 147 aa16.58■□□□□ 0.24
PTPN20-203ENST00000374342 CTSCP53634 463 aa16.58■□□□□ 0.24
PTPN20-203ENST00000374342 SEC13P55735 322 aa16.58■□□□□ 0.24
PTPN20-203ENST00000374342 CNTN1Q12860 1018 aa16.58■□□□□ 0.24
PTPN20-203ENST00000374342 CYLC2Q14093 348 aaPredicted RBP16.58■□□□□ 0.24
PTPN20-203ENST00000374342 HERC3Q15034 1050 aa16.58■□□□□ 0.24
PTPN20-203ENST00000374342 RAET1GQ6H3X3 334 aa16.58■□□□□ 0.24
PTPN20-203ENST00000374342 SULT1C3Q6IMI6 304 aa16.58■□□□□ 0.24
PTPN20-203ENST00000374342 GK5Q6ZS86 529 aa16.58■□□□□ 0.24
PTPN20-203ENST00000374342 UBE2R2Q712K3 238 aaPredicted RBP16.58■□□□□ 0.24
PTPN20-203ENST00000374342 MTSS1LQ765P7 747 aa16.58■□□□□ 0.24
PTPN20-203ENST00000374342 CYP2U1Q7Z449 544 aa16.58■□□□□ 0.24
PTPN20-203ENST00000374342 ULK2Q8IYT8 1036 aa16.58■□□□□ 0.24
PTPN20-203ENST00000374342 CDYL2Q8N8U2 506 aa16.58■□□□□ 0.24
PTPN20-203ENST00000374342 RASGEF1AQ8N9B8 481 aa16.58■□□□□ 0.24
PTPN20-203ENST00000374342 UBTD2Q8WUN7 234 aa16.58■□□□□ 0.24
PTPN20-203ENST00000374342 AKTIPQ9H8T0 292 aa16.58■□□□□ 0.24
PTPN20-203ENST00000374342 RDH14Q9HBH5 336 aa16.58■□□□□ 0.24
PTPN20-203ENST00000374342 FBRSL1Q9HCM7 1045 aaKnown RBP16.58■□□□□ 0.24
PTPN20-203ENST00000374342 K7ESM1 405 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 QSOX1O00391 747 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 KPNA5O15131 536 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 TSPAN6O43657 245 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 TM7SF2O76062 418 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 PKNOX1P55347 436 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 CREB5Q02930 508 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 SYTL3Q4VX76 610 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 LETMD1Q6P1Q0 360 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 EFL1Q7Z2Z2 1120 aaKnown RBP16.57■□□□□ 0.24
PTPN20-203ENST00000374342 TRIM74Q86UV6 250 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 SCUBE1Q8IWY4 988 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 ZNF513Q8N8E2 541 aaPredicted RBP16.57■□□□□ 0.24
PTPN20-203ENST00000374342 RP9Q8TA86 221 aaKnown RBP16.57■□□□□ 0.24
PTPN20-203ENST00000374342 CXorf40AQ8TE69 158 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 RHBDF1Q96CC6 855 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 TUBGCP3Q96CW5 907 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 OPTCQ9UBM4 332 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 POLG2Q9UHN1 485 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 ANGPTL3Q9Y5C1 460 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 COL4A2P08572 1712 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 PABPN1LA6NDY0 278 aaKnown RBP16.57■□□□□ 0.24
PTPN20-203ENST00000374342 TMEM202A6NGA9 273 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 OR7A17O14581 309 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 AIM2O14862 343 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 SOD1P00441 154 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 C8GP07360 202 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 ALDOCP09972 364 aaKnown RBP16.57■□□□□ 0.24
PTPN20-203ENST00000374342 MPC1LP0DKB6 136 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 PBLDP30039 288 aaPredicted RBP16.57■□□□□ 0.24
PTPN20-203ENST00000374342 FASTKQ14296 549 aaKnown RBP16.57■□□□□ 0.24
PTPN20-203ENST00000374342 TMEM52BQ4KMG9 183 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 WASHC2DQ5SRD0 308 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 ZNF765Q7L2R6 523 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 SNX31Q8N9S9 440 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 CSGALNACT1Q8TDX6 532 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 ATP6V1E2Q96A05 226 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 RCN3Q96D15 328 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 HDAC8Q9BY41 377 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 CD244Q9BZW8 370 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 ARL15Q9NXU5 204 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 PDE10AQ9Y233 779 aa16.57■□□□□ 0.24
PTPN20-203ENST00000374342 ATG2BQ96BY7 2078 aa16.56■□□□□ 0.24
PTPN20-203ENST00000374342 ATG13O75143 517 aa16.56■□□□□ 0.24
PTPN20-203ENST00000374342 CIB2O75838 187 aa16.56■□□□□ 0.24
PTPN20-203ENST00000374342 BMP8BP34820 402 aa16.56■□□□□ 0.24
PTPN20-203ENST00000374342 LTBRP36941 435 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms