RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 CHRNB4P30926 498 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 WDR49Q8IV35 697 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 OTUB2Q96DC9 234 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 MAGEB18Q96M61 343 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 FUT8Q9BYC5 575 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 ANKZF1Q9H8Y5 726 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 KIAA1522Q9P206 1035 aaPredicted RBP9.65□□□□□ -0.86
CHD3-202ENST00000358181 MYEF2Q9P2K5 600 aaKnown RBP9.65□□□□□ -0.86
CHD3-202ENST00000358181 ZNF69Q9UC07 566 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 ATXN7L1Q9ULK2 861 aaPredicted RBP9.65□□□□□ -0.86
CHD3-202ENST00000358181 NFASCO94856 1347 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 LRRIQ1Q96JM4 1722 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 MAGEB16A2A368 324 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 TVP23AA6NH52 213 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 MEN1O00255 615 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 DCXO43602 365 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 AKAP3O75969 853 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 ACTL6BO94805 426 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 IPO13O94829 963 aaKnown RBP9.65□□□□□ -0.86
CHD3-202ENST00000358181 PTPRMP28827 1452 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 LEPRP48357 1165 aaKnown RBP9.65□□□□□ -0.86
CHD3-202ENST00000358181 TIMM50Q3ZCQ8 353 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 CYP2U1Q7Z449 544 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 ZNF557Q8N988 423 aaPredicted RBP9.65□□□□□ -0.86
CHD3-202ENST00000358181 OR52K1Q8NGK4 314 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 OR4C6Q8NH72 309 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 GNB4Q9HAV0 340 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 TMEM150CB9EJG8 249 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 FBP2O00757 339 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 SUV39H1O43463 412 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 UGT2B4P06133 528 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 CD247P20963 164 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 MAGEA3P43357 314 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 RPL11P62913 178 aaKnown RBP9.65□□□□□ -0.86
CHD3-202ENST00000358181 MRPS6P82932 125 aaKnown RBP9.65□□□□□ -0.86
CHD3-202ENST00000358181 CBLBQ13191 982 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 MTFR2Q6P444 385 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 PIK3C3Q8NEB9 887 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 ARL5BQ96KC2 179 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 MFSD14AQ96MC6 490 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 MLXQ9UH92 298 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 ZNF490Q9ULM2 529 aaPredicted RBP9.65□□□□□ -0.86
CHD3-202ENST00000358181 MAPRE3Q9UPY8 281 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 BORCS7-ASMTA0A0B4J1R7 106 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 CTBP2P56545 445 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 ACTR1AP61163 376 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 XIAPP98170 497 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 FAM76BQ5HYJ3 339 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 KCTD9Q7L273 389 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 ZER1Q7Z7L7 766 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 OR8H3Q8N146 312 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 BORCS7Q96B45 105 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 MYO19Q96H55 970 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 INO80Q9ULG1 1556 aaPredicted RBP9.65□□□□□ -0.86
CHD3-202ENST00000358181 M0R2N6 131 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 ATG13O75143 517 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 TNFP01375 233 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 JUPP14923 745 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 OR1D2P34982 312 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 SLC2A1P11166 492 aa9.65□□□□□ -0.87
CHD3-202ENST00000358181 ZNF41P51814 821 aaPredicted RBP9.65□□□□□ -0.87
CHD3-202ENST00000358181 DMWDQ09019 674 aa9.65□□□□□ -0.87
CHD3-202ENST00000358181 C9orf152Q5JTZ5 239 aa9.65□□□□□ -0.87
CHD3-202ENST00000358181 ANXA8L1Q5VT79 327 aa9.65□□□□□ -0.87
CHD3-202ENST00000358181 LRIG3Q6UXM1 1119 aa9.65□□□□□ -0.87
CHD3-202ENST00000358181 SLC43A2Q8N370 569 aa9.65□□□□□ -0.87
CHD3-202ENST00000358181 THEM6Q8WUY1 208 aa9.65□□□□□ -0.87
CHD3-202ENST00000358181 CCDC59Q9P031 241 aaKnown RBP9.65□□□□□ -0.87
CHD3-202ENST00000358181 CA14Q9ULX7 337 aa9.65□□□□□ -0.87
CHD3-202ENST00000358181 TMX2Q9Y320 296 aa9.65□□□□□ -0.87
CHD3-202ENST00000358181 TNPO3Q9Y5L0 923 aaKnown RBP9.65□□□□□ -0.87
CHD3-202ENST00000358181 CAPN6Q9Y6Q1 641 aa9.65□□□□□ -0.87
CHD3-202ENST00000358181 MAU2Q9Y6X3 613 aa9.65□□□□□ -0.87
CHD3-202ENST00000358181 RECQL4O94761 1208 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 NFATC1O95644 943 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 CTSKP43235 329 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 CPTPQ5TA50 214 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 BICRALQ6AI39 1079 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 CAPN13Q6MZZ7 669 aaPredicted RBP9.64□□□□□ -0.87
CHD3-202ENST00000358181 TMC3Q7Z5M5 1100 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 LRRN4CLQ8ND94 238 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 RCBTB1Q8NDN9 531 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 PYDC1Q8WXC3 89 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 HTRA1Q92743 480 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 OR10A4Q9H209 315 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 MRPS30Q9NP92 439 aaKnown RBP9.64□□□□□ -0.87
CHD3-202ENST00000358181 ACSS2Q9NR19 701 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 STOX2Q9P2F5 926 aaPredicted RBP9.64□□□□□ -0.87
CHD3-202ENST00000358181 AGO1Q9UL18 857 aaKnown RBP9.64□□□□□ -0.87
CHD3-202ENST00000358181 ABCA9Q8IUA7 1624 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 PRAMEF33A0A0G2JMD5 474 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 EML1O00423 815 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 TNFRSF10BO14763 440 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 PRAMEF10O60809 474 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 REM1O75628 298 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 SFTPBP07988 381 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 ITIH1P19827 911 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 AFF1P51825 1210 aaKnown RBP9.64□□□□□ -0.87
CHD3-202ENST00000358181 SLC34A1Q06495 639 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 FRG1Q14331 258 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms