RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 CXCL14O95715 111 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 SMIM10L2AP0DMW4 78 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 SMIM10L2BP0DMW5 78 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 CDH1P12830 882 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 PTPRAP18433 802 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 TSPAN8P19075 237 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 CDH8P55286 799 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 NOMO3P69849 1222 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 SMAD3P84022 425 aaKnown RBP12.69□□□□□ -0.38
SMC4-202ENST00000357388 PCDH1Q08174 1060 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 LCP2Q13094 533 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 ABCA11PQ4W5N1 156 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 HECTD2Q5U5R9 776 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 GALNTL5Q7Z4T8 443 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 CCDC86Q9H6F5 360 aaKnown RBP12.69□□□□□ -0.38
SMC4-202ENST00000357388 SGK2Q9HBY8 427 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 ZDHHC4Q9NPG8 344 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 FARSBQ9NSD9 589 aaKnown RBP12.69□□□□□ -0.38
SMC4-202ENST00000357388 RPP40O75818 363 aaKnown RBP12.69□□□□□ -0.38
SMC4-202ENST00000357388 CXCR3P49682 368 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 STXBP1P61764 594 aaKnown RBP12.69□□□□□ -0.38
SMC4-202ENST00000357388 CSTF1Q05048 431 aaKnown RBP12.69□□□□□ -0.38
SMC4-202ENST00000357388 GXYLT1Q4G148 440 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 FAM35AQ86V20 835 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 COPS8Q99627 209 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 NUDT15Q9NV35 164 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 KAT7O95251 611 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 CYP11A1P05108 521 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 DCKP27707 260 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 HTR7P34969 479 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 OR3A3P47888 321 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 OR3A2P47893 321 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 APLP1P51693 650 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 CRYBB1P53674 252 aaPredicted RBP12.69□□□□□ -0.38
SMC4-202ENST00000357388 EEFSECP57772 596 aaKnown RBP12.69□□□□□ -0.38
SMC4-202ENST00000357388 RAB5BP61020 215 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 RASGEF1BQ0VAM2 473 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 ABRQ12979 859 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 SPATS1Q496A3 300 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 OGFRL1Q5TC84 451 aaPredicted RBP12.69□□□□□ -0.38
SMC4-202ENST00000357388 DET1Q7L5Y6 550 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 ZDHHC21Q8IVQ6 265 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 CFAP206Q8IYR0 622 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 OR10G6Q8NH81 332 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 ZNF420Q8TAQ5 688 aaPredicted RBP12.69□□□□□ -0.38
SMC4-202ENST00000357388 CEP295NLQ96MC4 621 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 ASF1AQ9Y294 204 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 SETD1BQ9UPS6 1966 aaKnown RBP12.69□□□□□ -0.38
SMC4-202ENST00000357388 CAMSAP1Q5T5Y3 1602 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 TBC1D3DA0A087WVF3 549 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 TBC1D3IA0A087WXS9 549 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 A0A087X0B3 334 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 TBC1D3EA0A087X179 549 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 TBC1D3KA0A087X1G2 549 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 TBC1D3FA6NER0 549 aaPredicted RBP12.69□□□□□ -0.38
SMC4-202ENST00000357388 TBC1D3LB9A6J9 549 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 HCN1O60741 890 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 NME6O75414 186 aaPredicted RBP12.69□□□□□ -0.38
SMC4-202ENST00000357388 GABBR2O75899 941 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 ELFN1P0C7U0 828 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 TBC1D3HP0C7X1 549 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 HOXC12P31275 282 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 RGS8P57771 180 aaPredicted RBP12.69□□□□□ -0.38
SMC4-202ENST00000357388 CBX2Q14781 532 aaPredicted RBP12.69□□□□□ -0.38
SMC4-202ENST00000357388 DPY19L1Q2PZI1 675 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 NADK2Q4G0N4 442 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 BRMS1LQ5PSV4 323 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 TBC1D3GQ6DHY5 549 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 TBC1D3CQ6IPX1 549 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 LRRC55Q6ZSA7 311 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 UBE2R2Q712K3 238 aaPredicted RBP12.69□□□□□ -0.38
SMC4-202ENST00000357388 PARGQ86W56 976 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 TBC1D3Q8IZP1 549 aaPredicted RBP12.69□□□□□ -0.38
SMC4-202ENST00000357388 C12orf50Q8NA57 414 aaPredicted RBP12.69□□□□□ -0.38
SMC4-202ENST00000357388 FBXO22Q8NEZ5 403 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 AKT1S1Q96B36 256 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 ZNF570Q96NI8 536 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 LENG8Q96PV6 779 aaPredicted RBP12.69□□□□□ -0.38
SMC4-202ENST00000357388 AGAP2Q99490 1192 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 AARSD1Q9BTE6 412 aaKnown RBP12.69□□□□□ -0.38
SMC4-202ENST00000357388 OSBPL7Q9BZF2 842 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 TBC1D17Q9HA65 648 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 COMMD3Q9UBI1 195 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 SEC14L4Q9UDX3 406 aa12.69□□□□□ -0.38
SMC4-202ENST00000357388 CYB5AP00167 134 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 ABL2P42684 1182 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 CCL23P55773 120 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 CNTN2Q02246 1040 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 PTP4A2Q12974 167 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 CTBP1Q13363 440 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 CHADLQ6NUI6 762 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 ZNF782Q6ZMW2 699 aaPredicted RBP12.68□□□□□ -0.38
SMC4-202ENST00000357388 RALGPS2Q86X27 583 aaPredicted RBP12.68□□□□□ -0.38
SMC4-202ENST00000357388 SLC37A3Q8NCC5 494 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 RIT1Q92963 219 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 SEMA3CQ99985 751 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 POLR2J2Q9GZM3 115 aaKnown RBP12.68□□□□□ -0.38
SMC4-202ENST00000357388 DCSTAMPQ9H295 470 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 UCKL1Q9NWZ5 548 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 C1orf109Q9NX04 203 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms