RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 OR52A5Q9H2C5 316 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 RHOJQ9H4E5 214 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 APOBEC3BQ9UH17 382 aaKnown RBP3.95□□□□□ -1.78
LIG4-201ENST00000356922 ASB1Q9Y576 335 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 ITPR1Q14643 2758 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 PPM1DO15297 605 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 VEGFDO43915 354 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 SNRNP200O75643 2136 aaKnown RBP3.94□□□□□ -1.78
LIG4-201ENST00000356922 SYF2O95926 243 aaKnown RBP3.94□□□□□ -1.78
LIG4-201ENST00000356922 LMNAP02545 664 aaKnown RBP3.94□□□□□ -1.78
LIG4-201ENST00000356922 C2P06681 752 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 RETP07949 1114 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 ZNF806P0C7X5 589 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 ACADLP28330 430 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 STX2P32856 288 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 SLC19A1P41440 591 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 ACTR1BP42025 376 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 ACTR1AP61163 376 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 ABRQ12979 859 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 PRKG2Q13237 762 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 GRB7Q14451 532 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 GBX1Q14549 363 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 PHKG1Q16816 387 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 DUOXA1Q1HG43 343 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 KLHL38Q2WGJ6 581 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 TNFAIP8L3Q5GJ75 292 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 PTRHD1Q6GMV3 140 aaKnown RBP3.94□□□□□ -1.78
LIG4-201ENST00000356922 RPS27LQ71UM5 84 aaKnown RBP3.94□□□□□ -1.78
LIG4-201ENST00000356922 IQCHQ86VS3 1027 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 C4orf33Q8N1A6 199 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 MINDY1Q8N5J2 469 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 OR2L2Q8NH16 312 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 ELMO1Q92556 727 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 NXNL1Q96CM4 212 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 UBXN10Q96LJ8 280 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 CPNE1Q99829 537 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 C1QTNF7Q9BXJ2 289 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 ZDHHC5Q9C0B5 715 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 TSPYL1Q9H0U9 437 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 SNX15Q9NRS6 342 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 INTS10Q9NVR2 710 aaKnown RBP3.94□□□□□ -1.78
LIG4-201ENST00000356922 WDR70Q9NW82 654 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 SIRPGQ9P1W8 387 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 SLC6A14Q9UN76 642 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 GPR34Q9UPC5 381 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 COMMD10Q9Y6G5 202 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 IKBKGQ9Y6K9 419 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 A0A1B0GTQ1 180 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 NEMP2A6NFY4 417 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 MGAT4DA6NG13 374 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 TNFRSF10CO14798 259 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 ZBTB14O43829 449 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 NOBOXO60393 691 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 TCEA3O75764 348 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 SLCO2B1O94956 709 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 ESR1P03372 595 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 IVLP07476 585 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 PYGBP11216 843 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 RPS3P23396 243 aaKnown RBP eCLIP3.94□□□□□ -1.78
LIG4-201ENST00000356922 HTR1BP28222 390 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 MSH2P43246 934 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 GLRBP48167 497 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 CLCNKAP51800 687 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 LAMB3Q13751 1172 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 ITIH4Q14624 930 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 USP10Q14694 798 aaKnown RBP3.94□□□□□ -1.78
LIG4-201ENST00000356922 OR4D1Q15615 310 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 BCL7AQ4VC05 210 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 TTMPQ5BVD1 217 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.94□□□□□ -1.78
LIG4-201ENST00000356922 CEP85LQ5SZL2 805 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 CES4AQ5XG92 561 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 PRR23CQ6ZRP0 262 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 KIAA0408Q6ZU52 694 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 LRRTM4Q86VH4 590 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 EXOC3L1Q86VI1 746 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 AMZ2Q86W34 360 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 FAM20CQ8IXL6 584 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 C2orf73Q8N5S3 287 aaPredicted RBP3.94□□□□□ -1.78
LIG4-201ENST00000356922 FAM46DQ8NEK8 389 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 OR5AR1Q8NGP9 310 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 CFAP61Q8NHU2 1237 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 GABPB2Q8TAK5 448 aaPredicted RBP3.94□□□□□ -1.78
LIG4-201ENST00000356922 KCTD4Q8WVF5 259 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 KCNJ9Q92806 393 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 SKA1Q96BD8 255 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 DCUN1D1Q96GG9 259 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 LINC00615Q96LM1 132 aaPredicted RBP3.94□□□□□ -1.78
LIG4-201ENST00000356922 PPM1MQ96MI6 270 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 TTC1Q99614 292 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 CCM2Q9BSQ5 444 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 FAM167BQ9BTA0 163 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 MENTQ9BUN1 341 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 SLC13A1Q9BZW2 595 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 OSGEPL1Q9H4B0 414 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 COG4Q9H9E3 785 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 IGSF5Q9NSI5 407 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 TAAR2Q9P1P5 351 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 EMCNQ9ULC0 261 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 PLAGL1Q9UM63 463 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms