RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 FSTL5Q8N475 847 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-202ENST00000356435 ATAD1Q8NBU5 361 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 CHST4Q8NCG5 386 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 EPS8L1Q8TE68 723 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 SETD7Q8WTS6 366 aaKnown RBP5.47□□□□□ -1.53
PTPRD-202ENST00000356435 KLRF1Q9NZS2 232 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 FAM198AQ9UFP1 575 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 MAP4K5Q9Y4K4 846 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 COL5A2P05997 1499 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-202ENST00000356435 BTBD19C9JJ37 291 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 PITPNM1O00562 1244 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 MEIS2O14770 477 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 EPHB6O15197 1021 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 FFAR2O15552 330 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 TM7SF2O76062 418 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 ZNF432O94892 652 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 NDST3O95803 873 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 LINGO3P0C6S8 592 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 PDGFRLQ15198 375 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 ANO7Q6IWH7 933 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 RHBDF2Q6PJF5 856 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 BBS12Q6ZW61 710 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 SLC29A4Q7RTT9 530 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 KREMEN2Q8NCW0 462 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 KLHL5Q96PQ7 755 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 GSDMCQ9BYG8 508 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 ENY2Q9NPA8 101 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 GTF2IRD1Q9UHL9 959 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 CFL2Q9Y281 166 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 ASTN1O14525 1302 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 TRBV23OR9-2A0A075B6M9 112 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 CYP3A7-CYP3A51PA0A087WV96 503 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 ELOA3DA6NLF2 546 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-202ENST00000356435 TGDSO95455 350 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 CYP3A7P24462 503 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 DUSP3P51452 185 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-202ENST00000356435 ELOA3BQ3SY89 546 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 TNFAIP8L3Q5GJ75 292 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 SPRYD7Q5W111 196 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 TTC27Q6P3X3 843 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 CFAP52Q8N1V2 620 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 PLA2G15Q8NCC3 412 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 ELOA3Q8NG57 546 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 ZNF514Q96K75 400 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-202ENST00000356435 HAPLN3Q96S86 360 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 MAGEH1Q9H213 219 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 NCDNQ9UBB6 729 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 EVLQ9UI08 416 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-202ENST00000356435 PSMD9O00233 223 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 DBTP11182 482 aaKnown RBP5.47□□□□□ -1.53
PTPRD-202ENST00000356435 MAT2AP31153 395 aaKnown RBP5.47□□□□□ -1.53
PTPRD-202ENST00000356435 CSTF2P33240 577 aaKnown RBP eCLIP5.47□□□□□ -1.53
PTPRD-202ENST00000356435 RPS9P46781 194 aaKnown RBP5.47□□□□□ -1.53
PTPRD-202ENST00000356435 MECP2P51608 486 aaKnown RBP5.47□□□□□ -1.53
PTPRD-202ENST00000356435 MAPK10P53779 464 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 FITM2Q8N6M3 262 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 ZNF433Q8N7K0 673 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-202ENST00000356435 OR2L3Q8NG85 312 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 TMEM125Q96AQ2 219 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 FAM163AQ96GL9 167 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-202ENST00000356435 DPYSL5Q9BPU6 564 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 TBL1XR1Q9BZK7 514 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 MKKSQ9NPJ1 570 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-202ENST00000356435 FARSBQ9NSD9 589 aaKnown RBP5.47□□□□□ -1.53
PTPRD-202ENST00000356435 BLOC1S4Q9NUP1 217 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 FADS2P1A8MWK0 482 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 CLDN5O00501 218 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 B4GALT5O43286 388 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 PLOD3O60568 738 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 TNFP01375 233 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 CD2P06729 351 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 ANPEPP15144 967 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 ZNF41P51814 821 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-202ENST00000356435 GHRHRQ02643 423 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 DCTN2Q13561 401 aaKnown RBP5.47□□□□□ -1.53
PTPRD-202ENST00000356435 PDK4Q16654 411 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 TIGD2Q4W5G0 525 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 NANOGNBQ7Z5D8 188 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 SLC9B2Q86UD5 537 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 CAND1Q86VP6 1230 aaKnown RBP5.47□□□□□ -1.53
PTPRD-202ENST00000356435 CROCCP3Q8IVE0 287 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 ZSWIM3Q96MP5 696 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 ZNF717Q9BY31 904 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-202ENST00000356435 OR2AG1Q9H205 316 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 CHST7Q9NS84 486 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 RNF19AQ9NV58 838 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 TBCCD1Q9NVR7 557 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 FBXO5Q9UKT4 447 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 RUVBL1Q9Y265 456 aaKnown RBP5.47□□□□□ -1.53
PTPRD-202ENST00000356435 NEMP2A6NFY4 417 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 H0YJX3 145 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 EDF1O60869 148 aaKnown RBP5.47□□□□□ -1.53
PTPRD-202ENST00000356435 C8AP07357 584 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 GSTT1P30711 240 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 OC90Q02509 493 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-202ENST00000356435 GTF2H2Q13888 395 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 DPYSQ14117 519 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 RAB39AQ14964 217 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 TLR1Q15399 786 aa5.47□□□□□ -1.53
PTPRD-202ENST00000356435 MED22Q15528 200 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms