RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 OR5H6Q8NGV6 325 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 PIK3R3Q92569 461 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 YIPF6Q96EC8 236 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 FAM167AQ96KS9 214 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 Q96MT0 163 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 APOL4Q9BPW4 351 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 CLSTN3Q9BQT9 956 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 TNKS2Q9H2K2 1166 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 TUBB1Q9H4B7 451 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 RBM22Q9NW64 420 aaKnown RBP eCLIP7.53□□□□□ -1.2
BRCA1-201ENST00000352993 RABL2AQ9UBK7 228 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-201ENST00000352993 RAPGEFL1Q9UHV5 662 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 RNF112Q9ULX5 631 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 GAS2O43903 313 aaKnown RBP7.53□□□□□ -1.2
BRCA1-201ENST00000352993 PEX10O60683 326 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 MATN4O95460 622 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 IQCF3P0C7M6 154 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 PFKLP17858 780 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 DNAJB1P25685 340 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 MASP1P48740 699 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 HMGCS2P54868 508 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 EMX2Q04743 252 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 CBX2Q14781 532 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-201ENST00000352993 NRARPQ7Z6K4 114 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 NLGN4XQ8N0W4 816 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 SVOPLQ8N434 492 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 CDYL2Q8N8U2 506 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 APPL2Q8NEU8 664 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 OR5K1Q8NHB7 308 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 PTERQ96BW5 349 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 RDH12Q96NR8 316 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 VPS35Q96QK1 796 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 VAT1Q99536 393 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 FZD8Q9H461 694 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 RNF167Q9H6Y7 350 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 ACOT13Q9NPJ3 140 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 PRMT7Q9NVM4 692 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-201ENST00000352993 OR12D3Q9UGF7 316 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 FBXO9Q9UK97 447 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-201ENST00000352993 FNDC3AQ9Y2H6 1198 aaKnown RBP7.53□□□□□ -1.2
BRCA1-201ENST00000352993 GPR45Q9Y5Y3 372 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 GGT5P36269 586 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 DCTP40126 519 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 HTR3AP46098 478 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 CDKN2DP55273 166 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 ZNF45Q02386 682 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 ANKS6Q68DC2 871 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 LAIR2Q6ISS4 152 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 CES5AQ6NT32 575 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 SYCE2Q6PIF2 218 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 ZNF438Q7Z4V0 828 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 CTU1Q7Z7A3 348 aaKnown RBP7.53□□□□□ -1.2
BRCA1-201ENST00000352993 TRIM48Q8IWZ4 208 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 UBE2FQ969M7 185 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 C12orf42Q96LP6 360 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 NEDD4LQ96PU5 975 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 BCL7BQ9BQE9 202 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 MCMBPQ9BTE3 642 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 WDCPQ9H6R7 721 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 RNF6Q9Y252 685 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 A0A1B0GTL3 188 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 ASPDHA6ND91 283 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 OR6C70A6NIJ9 312 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 DFNA5O60443 496 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 EEDO75530 441 aaKnown RBP7.52□□□□□ -1.21
BRCA1-201ENST00000352993 DIRAS1O95057 198 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 VTNP04004 478 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 YES1P07947 543 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 SOX6P35712 828 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 CTSKP43235 329 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 GEMP55040 296 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 FCGRTP55899 365 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 TUBA1BP68363 451 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 MBTD1Q05BQ5 628 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 GALNT1Q10472 559 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-201ENST00000352993 TP53BP2Q13625 1128 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 RCAN2Q14206 197 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 NR6A1Q15406 480 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 PKDCCQ504Y2 493 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 VARS2Q5ST30 1063 aaKnown RBP7.52□□□□□ -1.21
BRCA1-201ENST00000352993 TUBA1AQ71U36 451 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 SPATA19Q7Z5L4 167 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 NECAB2Q7Z6G3 386 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 TMEM179BQ7Z7N9 219 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 PYCR2Q96C36 320 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 NECTIN4Q96NY8 510 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 ASB2Q96Q27 587 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 ITPAQ9BY32 194 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 CARS2Q9HA77 564 aaKnown RBP7.52□□□□□ -1.21
BRCA1-201ENST00000352993 RANGRFQ9HD47 186 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-201ENST00000352993 NUFIP1Q9UHK0 495 aaKnown RBP7.52□□□□□ -1.21
BRCA1-201ENST00000352993 OSGIN1Q9UJX0 560 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 FAM50BQ9Y247 325 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 TANC1Q9C0D5 1861 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 METTL15A6NJ78 407 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 ENPP3O14638 875 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 VPS4BO75351 444 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 PRDX3P30048 256 aaKnown RBP7.52□□□□□ -1.21
BRCA1-201ENST00000352993 TKTL1P51854 596 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 MAP3K7CLP57077 242 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms