RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 FAM187BQ17R55 369 aa14.96□□□□□ -0.01
PTBP1-201ENST00000349038 RBM48Q5RL73 367 aaKnown RBP14.96□□□□□ -0.01
PTBP1-201ENST00000349038 PLPPR4Q7Z2D5 763 aa14.96□□□□□ -0.01
PTBP1-201ENST00000349038 HIPK1Q86Z02 1210 aa14.96□□□□□ -0.01
PTBP1-201ENST00000349038 FDXACB1Q9BRP7 624 aaPredicted RBP14.96□□□□□ -0.01
PTBP1-201ENST00000349038 GSTO2Q9H4Y5 243 aa14.96□□□□□ -0.01
PTBP1-201ENST00000349038 KAT8Q9H7Z6 458 aaKnown RBP14.96□□□□□ -0.01
PTBP1-201ENST00000349038 CPNE5Q9HCH3 593 aa14.96□□□□□ -0.01
PTBP1-201ENST00000349038 ZFP14Q9HCL3 533 aa14.96□□□□□ -0.01
PTBP1-201ENST00000349038 CCDC177Q9NQR7 707 aaPredicted RBP14.96□□□□□ -0.01
PTBP1-201ENST00000349038 TAS2R9Q9NYW1 312 aa14.96□□□□□ -0.01
PTBP1-201ENST00000349038 FBXO10Q9UK96 956 aa14.96□□□□□ -0.01
PTBP1-201ENST00000349038 KCTD3Q9Y597 815 aa14.96□□□□□ -0.01
PTBP1-201ENST00000349038 TARM1B6A8C7 271 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 C19orf81C9J6K1 198 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 SLC10A3P09131 477 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 ARCN1P48444 511 aaKnown RBP14.95□□□□□ -0.02
PTBP1-201ENST00000349038 KPNA2P52292 529 aaKnown RBP14.95□□□□□ -0.02
PTBP1-201ENST00000349038 CDK5R2Q13319 367 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 SNX17Q15036 470 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 AGAP6Q5VW22 663 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 USP51Q70EK9 711 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 ANKRD46Q86W74 232 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 CAMKK1Q8N5S9 505 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 C18orf25Q96B23 403 aaPredicted RBP14.95□□□□□ -0.02
PTBP1-201ENST00000349038 CDCA5Q96FF9 252 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 AGAP4Q96P64 663 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 YME1L1Q96TA2 773 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 SLC7A5P2Q9GIP4 190 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 OR51E2Q9H255 320 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 GOLGA2P5Q9HBQ8 144 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 SHROOM3Q8TF72 1996 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 PGRP06401 933 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 KRT6CP48668 564 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 AGTR2P50052 363 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 PON2Q15165 354 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 NKG7Q16617 165 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 EFCAB12Q6NXP0 572 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 RAB44Q7Z6P3 723 aaPredicted RBP14.95□□□□□ -0.02
PTBP1-201ENST00000349038 P3H2Q8IVL5 708 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 COLGALT2Q8IYK4 626 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 ST13P5Q8NFI4 369 aaPredicted RBP14.95□□□□□ -0.02
PTBP1-201ENST00000349038 CDC26Q8NHZ8 85 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 DYNC2LI1Q8TCX1 351 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 SLC47A1Q96FL8 570 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 CLSTN3Q9BQT9 956 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 OR2B2Q9GZK3 357 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 SLIRPQ9GZT3 109 aaKnown RBP14.95□□□□□ -0.02
PTBP1-201ENST00000349038 HOXC10Q9NYD6 342 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 C3orf18Q9UK00 162 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 TBKBP1A7MCY6 615 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 SLC22A3O75751 556 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 ALX3O95076 343 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 ARIH2O95376 493 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 ANXA6P08133 673 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 PRSS56P0CW18 603 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 YBX3P16989 372 aaKnown RBP eCLIP14.95□□□□□ -0.024e-11■■□□□ 12.1
PTBP1-201ENST00000349038 NKX3-2P78367 333 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 PPP2R2BQ00005 443 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 CACNB2Q08289 660 aaPredicted RBP14.95□□□□□ -0.02
PTBP1-201ENST00000349038 PTCHD3Q3KNS1 767 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 GTDC1Q4AE62 458 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 TECRLQ5HYJ1 363 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 ZNF438Q7Z4V0 828 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 CCDC28AQ8IWP9 274 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 ZSCAN5AQ9BUG6 496 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 TUBB1Q9H4B7 451 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 COMMD8Q9NX08 183 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 TAS2R16Q9NYV7 291 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 ZMYM5Q9UJ78 669 aa14.95□□□□□ -0.02
PTBP1-201ENST00000349038 LAMA3Q16787 3333 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 KMOO15229 486 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 AKR7A2O43488 359 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 DFNA5O60443 496 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 PTPN2P17706 415 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 POLR2EP19388 210 aaKnown RBP14.94□□□□□ -0.02
PTBP1-201ENST00000349038 CYP2B6P20813 491 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 RPL34P49207 117 aaKnown RBP14.94□□□□□ -0.02
PTBP1-201ENST00000349038 TGM4P49221 684 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 POLR2JP52435 117 aaKnown RBP14.94□□□□□ -0.02
PTBP1-201ENST00000349038 MVKQ03426 396 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 DMC1Q14565 340 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 UNC50Q53HI1 259 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 Q5BKY6 102 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 ZMAT1Q5H9K5 638 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 GPR153Q6NV75 609 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 GET4Q7L5D6 327 aaPredicted RBP14.94□□□□□ -0.02
PTBP1-201ENST00000349038 AMIGO1Q86WK6 493 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 EID3Q8N140 333 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 MINDY2Q8NBR6 621 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 KATNAL1Q9BW62 490 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 CASS4Q9NQ75 786 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 IGSF5Q9NSI5 407 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 FKBP9O95302 570 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 HSD17B1P14061 328 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 SSTR4P31391 388 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 LIPAP38571 399 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 SLC26A2P50443 739 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 PCID2Q5JVF3 399 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 HECTD2Q5U5R9 776 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms