RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 HLA-DMAP28067 261 aa18.27■□□□□ 0.52
SMPD1-201ENST00000342245 NOS2P35228 1153 aa18.27■□□□□ 0.52
SMPD1-201ENST00000342245 OLIG2Q13516 323 aa18.27■□□□□ 0.52
SMPD1-201ENST00000342245 GRB7Q14451 532 aa18.27■□□□□ 0.52
SMPD1-201ENST00000342245 PCID2Q5JVF3 399 aa18.27■□□□□ 0.52
SMPD1-201ENST00000342245 OR8H2Q8N162 312 aa18.27■□□□□ 0.52
SMPD1-201ENST00000342245 DPP10Q8N608 796 aa18.27■□□□□ 0.52
SMPD1-201ENST00000342245 TMEM74Q96NL1 305 aa18.27■□□□□ 0.52
SMPD1-201ENST00000342245 CDHR5Q9HBB8 845 aa18.27■□□□□ 0.52
SMPD1-201ENST00000342245 AP3M1Q9Y2T2 418 aa18.27■□□□□ 0.52
SMPD1-201ENST00000342245 MEN1O00255 615 aa18.27■□□□□ 0.51
SMPD1-201ENST00000342245 PIP5K1BO14986 540 aa18.27■□□□□ 0.51
SMPD1-201ENST00000342245 ALPPP05187 535 aa18.27■□□□□ 0.51
SMPD1-201ENST00000342245 CYP2C8P10632 490 aa18.27■□□□□ 0.51
SMPD1-201ENST00000342245 TGFBR1P36897 503 aa18.27■□□□□ 0.51
SMPD1-201ENST00000342245 MAPK12P53778 367 aa18.27■□□□□ 0.51
SMPD1-201ENST00000342245 DSTNP60981 165 aa18.27■□□□□ 0.51
SMPD1-201ENST00000342245 FBXO43Q4G163 708 aa18.27■□□□□ 0.51
SMPD1-201ENST00000342245 PAGE3Q5JUK9 113 aa18.27■□□□□ 0.51
SMPD1-201ENST00000342245 KANK2Q63ZY3 851 aa18.27■□□□□ 0.51
SMPD1-201ENST00000342245 PKN3Q6P5Z2 889 aa18.27■□□□□ 0.51
SMPD1-201ENST00000342245 FAM171BQ6P995 826 aa18.27■□□□□ 0.51
SMPD1-201ENST00000342245 MFSD6LQ8IWD5 586 aa18.27■□□□□ 0.51
SMPD1-201ENST00000342245 PHF21BQ96EK2 531 aa18.27■□□□□ 0.51
SMPD1-201ENST00000342245 SLC47A1Q96FL8 570 aa18.27■□□□□ 0.51
SMPD1-201ENST00000342245 SDHCQ99643 169 aaPredicted RBP18.27■□□□□ 0.51
SMPD1-201ENST00000342245 TM9SF2Q99805 663 aa18.27■□□□□ 0.51
SMPD1-201ENST00000342245 ZSCAN5AQ9BUG6 496 aa18.27■□□□□ 0.51
SMPD1-201ENST00000342245 TRIM8Q9BZR9 551 aa18.27■□□□□ 0.51
SMPD1-201ENST00000342245 MAGIXQ9H6Y5 334 aa18.27■□□□□ 0.51
SMPD1-201ENST00000342245 CHST12Q9NRB3 414 aa18.27■□□□□ 0.51
SMPD1-201ENST00000342245 ASPDHA6ND91 283 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 EDN1P05305 212 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 ACADMP11310 421 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 HOXD8P13378 290 aaPredicted RBP18.26■□□□□ 0.51
SMPD1-201ENST00000342245 CPB1P15086 417 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 DCTP40126 519 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 GZMKP49863 264 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 HERVK_113P63132 956 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 ZMIZ2Q8NF64 920 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 TAAR1Q96RJ0 339 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 VAT1Q99536 393 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 PDCD2LQ9BRP1 358 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 ERVK-6Q9BXR3 956 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 SLC22A4Q9H015 551 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 C3orf14Q9HBI5 128 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 CFL2Q9Y281 166 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 COL2A1P02458 1487 aaPredicted RBP18.26■□□□□ 0.51
SMPD1-201ENST00000342245 SSC5DA1L4H1 1573 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 A0A075B6Q4 140 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 LINC00862A6NCI5 91 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 CCDC182A6NF36 153 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 KPNA6O60684 536 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 SLC22A3O75751 556 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 C1RP00736 705 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 PFKMP08237 780 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 PAMP19021 973 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 APLP1P51693 650 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 POLR2JP52435 117 aaKnown RBP18.26■□□□□ 0.51
SMPD1-201ENST00000342245 PGGT1BP53609 377 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 MAP3K7CLP57077 242 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 MXD4Q14582 209 aaPredicted RBP18.26■□□□□ 0.51
SMPD1-201ENST00000342245 TOR1AIP1Q5JTV8 583 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 DPH6Q7L8W6 267 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 AMIGO1Q86WK6 493 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 C2CD4AQ8NCU7 369 aaPredicted RBP18.26■□□□□ 0.51
SMPD1-201ENST00000342245 OR10Z1Q8NGY1 313 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 SIGLEC11Q96RL6 698 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.26■□□□□ 0.51
SMPD1-201ENST00000342245 DYRK4Q9NR20 520 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 AIG1Q9NVV5 245 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 WDR70Q9NW82 654 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 TMEFF2Q9UIK5 374 aaPredicted RBP18.26■□□□□ 0.51
SMPD1-201ENST00000342245 FZD10Q9ULW2 581 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.26■□□□□ 0.51
SMPD1-201ENST00000342245 SNX7Q9UNH6 387 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 KCNE2Q9Y6J6 123 aa18.26■□□□□ 0.51
SMPD1-201ENST00000342245 FAM234BA2RU67 622 aa18.25■□□□□ 0.51
SMPD1-201ENST00000342245 OR6C70A6NIJ9 312 aa18.25■□□□□ 0.51
SMPD1-201ENST00000342245 C1QBP02746 253 aa18.25■□□□□ 0.51
SMPD1-201ENST00000342245 RAB44Q7Z6P3 723 aaPredicted RBP18.25■□□□□ 0.51
SMPD1-201ENST00000342245 ACER1Q8TDN7 264 aa18.25■□□□□ 0.51
SMPD1-201ENST00000342245 UQCC2Q9BRT2 126 aa18.25■□□□□ 0.51
SMPD1-201ENST00000342245 ACTR8Q9H981 624 aa18.25■□□□□ 0.51
SMPD1-201ENST00000342245 EXD2Q9NVH0 621 aa18.25■□□□□ 0.51
SMPD1-201ENST00000342245 ZIM2Q9NZV7 527 aa18.25■□□□□ 0.51
SMPD1-201ENST00000342245 BTRCQ9Y297 605 aa18.25■□□□□ 0.51
SMPD1-201ENST00000342245 AUP1Q9Y679 476 aa18.25■□□□□ 0.51
SMPD1-201ENST00000342245 NRXN2Q9P2S2 1712 aa18.25■□□□□ 0.51
SMPD1-201ENST00000342245 SUPT20HL2P0C7V6 817 aa18.25■□□□□ 0.51
SMPD1-201ENST00000342245 ZNF30P17039 623 aa18.25■□□□□ 0.51
SMPD1-201ENST00000342245 RFX2P48378 723 aa18.25■□□□□ 0.51
SMPD1-201ENST00000342245 RGS7P49802 495 aa18.25■□□□□ 0.51
SMPD1-201ENST00000342245 SLC14A2Q15849 920 aa18.25■□□□□ 0.51
SMPD1-201ENST00000342245 DDR2Q16832 855 aa18.25■□□□□ 0.51
SMPD1-201ENST00000342245 UNC50Q53HI1 259 aa18.25■□□□□ 0.51
SMPD1-201ENST00000342245 LRRC8DQ7L1W4 858 aa18.25■□□□□ 0.51
SMPD1-201ENST00000342245 CCDC117Q8IWD4 279 aaPredicted RBP18.25■□□□□ 0.51
SMPD1-201ENST00000342245 PMEPA1Q969W9 287 aa18.25■□□□□ 0.51
SMPD1-201ENST00000342245 TOE1Q96GM8 510 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms