RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 MED27Q6P2C8 311 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 ENPP7Q6UWV6 458 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 FAM47BQ8NA70 645 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 GPR21Q99679 349 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 CDT1Q9H211 546 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 CACNG4Q9UBN1 327 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 EIF3KQ9UBQ5 218 aaKnown RBP11.64□□□□□ -0.55
SHANK2-201ENST00000338508 RAPGEFL1Q9UHV5 662 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 CFAP20Q9Y6A4 193 aaKnown RBP11.64□□□□□ -0.55
SHANK2-201ENST00000338508 UBXN7O94888 489 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 RPL17P18621 184 aaKnown RBP11.64□□□□□ -0.55
SHANK2-201ENST00000338508 SPAM1P38567 509 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 CRYBB1P53674 252 aaPredicted RBP11.64□□□□□ -0.55
SHANK2-201ENST00000338508 TAS2R50P59544 299 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 C1QTNF8P60827 252 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 ALG10Q5BKT4 473 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 RANBP3LQ86VV4 465 aaPredicted RBP11.64□□□□□ -0.55
SHANK2-201ENST00000338508 FBXO22Q8NEZ5 403 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 AGAP11Q8TF27 550 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 NCDNQ9UBB6 729 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 TRPS1Q9UHF7 1281 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 RPH3AQ9Y2J0 694 aaPredicted RBP11.64□□□□□ -0.55
SHANK2-201ENST00000338508 PCDHGC4Q9Y5F7 938 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 WASF2Q9Y6W5 498 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 IRGMA1A4Y4 181 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 UGT2B11O75310 529 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 FGF1P05230 155 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 MYCLP1P12525 358 aaPredicted RBP11.64□□□□□ -0.55
SHANK2-201ENST00000338508 ATF4P18848 351 aaPredicted RBP11.64□□□□□ -0.55
SHANK2-201ENST00000338508 CYP2C18P33260 490 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 MAP3K8P41279 467 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 PRR5P85299 388 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 CSTF1Q05048 431 aaKnown RBP11.64□□□□□ -0.55
SHANK2-201ENST00000338508 GTF2H2Q13888 395 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 GTF2H2CQ6P1K8 395 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 FAM13CQ8NE31 585 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 TTYH1Q9H313 450 aaPredicted RBP11.64□□□□□ -0.55
SHANK2-201ENST00000338508 YARS2Q9Y2Z4 477 aaKnown RBP11.64□□□□□ -0.55
SHANK2-201ENST00000338508 PCDHAC2Q9Y5I4 1007 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 A0A1W2PPM1 405 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 KLRG2A4D1S0 409 aaPredicted RBP11.63□□□□□ -0.55
SHANK2-201ENST00000338508 ARCN1P48444 511 aaKnown RBP11.63□□□□□ -0.55
SHANK2-201ENST00000338508 XIAPP98170 497 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 MAP4K3Q8IVH8 894 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 BORCS8Q96FH0 119 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 CCDC86Q9H6F5 360 aaKnown RBP11.63□□□□□ -0.55
SHANK2-201ENST00000338508 MRPS30Q9NP92 439 aaKnown RBP11.63□□□□□ -0.55
SHANK2-201ENST00000338508 TELO2Q9Y4R8 837 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 NOL4O94818 638 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 PRAMEF1O95521 474 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 PSMA1P25786 263 aaKnown RBP11.63□□□□□ -0.55
SHANK2-201ENST00000338508 MARCKSL1P49006 195 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 S100A10P60903 97 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 DEFA5Q01523 94 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 GPR68Q15743 365 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 C9orf57Q5W0N0 161 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 ARL14EPQ8N8R7 260 aaPredicted RBP11.63□□□□□ -0.55
SHANK2-201ENST00000338508 TMEM145Q8NBT3 493 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 NXNL1Q96CM4 212 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 TMEM68Q96MH6 324 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 DUSP16Q9BY84 665 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 ENY2Q9NPA8 101 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 SLCO1B3Q9NPD5 702 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 PCDHGA6Q9Y5G7 932 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 AP4B1Q9Y6B7 739 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 ADGRB3O60242 1522 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 MPP1Q00013 466 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 RAB39AQ14964 217 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 USF2Q15853 346 aaPredicted RBP11.63□□□□□ -0.55
SHANK2-201ENST00000338508 UNC93AQ86WB7 457 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 SRFBP1Q8NEF9 429 aaKnown RBP11.63□□□□□ -0.55
SHANK2-201ENST00000338508 OR5B17Q8NGF7 314 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 OR2AT4A6NND4 320 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 LSM1O15116 133 aaKnown RBP11.63□□□□□ -0.55
SHANK2-201ENST00000338508 RENP00797 406 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 IFI30P13284 250 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 KIR3DL1P43629 444 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 DSC2Q02487 901 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 C1orf186Q6ZWK4 172 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.63□□□□□ -0.552e-6■■□□□ 13.9
SHANK2-201ENST00000338508 DNAAF2Q9NVR5 837 aaKnown RBP11.63□□□□□ -0.55
SHANK2-201ENST00000338508 E9PAM4 449 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 MAFKO60675 156 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 ITGA5P08648 1049 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 RGS19P49795 217 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 ILF2Q12905 390 aaKnown RBP11.63□□□□□ -0.55
SHANK2-201ENST00000338508 ZNF460Q14592 562 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 IL23RQ5VWK5 629 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 NOXRED1Q6NXP6 359 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 TNFAIP8L2Q6P589 184 aaPredicted RBP11.63□□□□□ -0.55
SHANK2-201ENST00000338508 RIOX2Q8IUF8 465 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 ZNF101Q8IZC7 436 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 SIDT2Q8NBJ9 832 aaKnown RBP11.63□□□□□ -0.55
SHANK2-201ENST00000338508 GSTCDQ8NEC7 633 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 TWIST2Q8WVJ9 160 aa11.63□□□□□ -0.55
SHANK2-201ENST00000338508 ZNF471Q9BX82 626 aaPredicted RBP11.63□□□□□ -0.55
SHANK2-201ENST00000338508 HBS1LQ9Y450 684 aaKnown RBP11.63□□□□□ -0.55
SHANK2-201ENST00000338508 FAM149AA5PLN7 773 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 WASHC1A8K0Z3 465 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 WASH3PC4AMC7 463 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms