RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 RERGQ96A58 199 aaPredicted RBP9.69□□□□□ -0.86
COL4A6-201ENST00000334504 PDCD2LQ9BRP1 358 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 OR51V1Q9H2C8 321 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 GPSM3Q9Y4H4 160 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 M0R233 179 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 CKMT2P17540 419 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 TPSB2P20231 275 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 TUBG1P23258 451 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 ENTPD1P49961 510 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 CLCQ05315 142 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 NOMO1Q15155 1222 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 TPSAB1Q15661 275 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 SCGB2B2Q4G0G5 96 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 ABCA11PQ4W5N1 156 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 AMIGO1Q86WK6 493 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 HEXDCQ8WVB3 486 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 DNAJB3Q8WWF6 145 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 TMEM203Q969S6 136 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 EBF4Q9BQW3 602 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 FUZQ9BT04 418 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 AMBNQ9NP70 447 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 BRD7Q9NPI1 651 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 GMIPQ9P107 970 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 SLC7A8Q9UHI5 535 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 PNPLA6Q8IY17 1366 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 PRMT3O60678 531 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 FOSL1P15407 271 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 KCNA5P22460 613 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 GLDCP23378 1020 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 FOXN2P32314 431 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 GRM3Q14832 879 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 POTEHQ6S545 545 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 METTL7BQ6UX53 244 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 SLC26A9Q7LBE3 791 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 ADGRA1Q86SQ6 560 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 C11orf65Q8NCR3 313 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 EXOC2Q96KP1 924 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 KXD1Q9BQD3 176 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 MSRAQ9UJ68 235 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 RPL36Q9Y3U8 105 aaKnown RBP9.69□□□□□ -0.86
COL4A6-201ENST00000334504 PCDHB12Q9Y5F1 795 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 DAPL1A0PJW8 107 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 URADA6NGE7 173 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 CAP2P40123 477 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 CXCR3P49682 368 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 MMP14P50281 582 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 ZNF81P51508 661 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 MPP1Q00013 466 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 C1orf186Q6ZWK4 172 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 DGLUCYQ7Z3D6 616 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 DNASE1L2Q92874 299 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 FEM1CQ96JP0 617 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 TM6SF2Q9BZW4 377 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 ZNF451Q9Y4E5 1061 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 CD2P06729 351 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 CREB1P16220 341 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 EPHX2P34913 555 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 ARL3P36405 182 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 LARS2Q15031 903 aaKnown RBP9.68□□□□□ -0.86
COL4A6-201ENST00000334504 IFI44LQ53G44 452 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 KLHL26Q53HC5 615 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 ANKRD22Q5VYY1 191 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 PAQR7Q86WK9 346 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 TMEM139Q8IV31 216 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 KLHL36Q8N4N3 616 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 DCBLD1Q8N8Z6 715 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 LINC00116Q8NCU8 138 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 EBPLQ9BY08 206 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 PCDH18Q9HCL0 1135 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 GRIN2DO15399 1336 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 C5orf60A6NFR6 353 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 HOXA2O43364 376 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 NTSR2O95665 410 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 PLATP00750 562 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 C8BP07358 591 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 RGS8P57771 180 aaPredicted RBP9.68□□□□□ -0.86
COL4A6-201ENST00000334504 SNRPD1P62314 119 aaKnown RBP9.68□□□□□ -0.86
COL4A6-201ENST00000334504 BMT2Q1RMZ1 405 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 RFTN2Q52LD8 501 aaPredicted RBP9.68□□□□□ -0.86
COL4A6-201ENST00000334504 TMEM236Q5W0B7 351 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 RBFAQ8N0V3 343 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 MTMR9Q96QG7 549 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 RIOK2Q9BVS4 552 aaKnown RBP9.68□□□□□ -0.86
COL4A6-201ENST00000334504 YTHDF1Q9BYJ9 559 aaKnown RBP9.68□□□□□ -0.86
COL4A6-201ENST00000334504 OAZ3Q9UMX2 235 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 ISM1B1AKI9 464 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 RGL2O15211 777 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 SEPT4O43236 478 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 RP2O75695 350 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 WNT3AP56704 352 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 TLR1Q15399 786 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 CHSY3Q70JA7 882 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 RBM23Q86U06 439 aaKnown RBP9.68□□□□□ -0.86
COL4A6-201ENST00000334504 SDR16C5Q8N3Y7 309 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 JOSD2Q8TAC2 188 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 AIF1LQ9BQI0 150 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 SLC39A3Q9BRY0 314 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 PLEKHA1Q9HB21 404 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 MYOZ2Q9NPC6 264 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 RCOR3Q9P2K3 495 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms