RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 GPR18Q14330 331 aa16.03■□□□□ 0.16
C11orf88-201ENST00000332814 HIF1AQ16665 826 aa16.03■□□□□ 0.16
C11orf88-201ENST00000332814 ZNF470Q6ECI4 717 aa16.03■□□□□ 0.16
C11orf88-201ENST00000332814 HIBCHQ6NVY1 386 aaPredicted RBP16.03■□□□□ 0.16
C11orf88-201ENST00000332814 NEPROQ6NW34 567 aa16.03■□□□□ 0.16
C11orf88-201ENST00000332814 TMEM135Q86UB9 458 aa16.03■□□□□ 0.16
C11orf88-201ENST00000332814 LMNTD2Q8IXW0 634 aa16.03■□□□□ 0.16
C11orf88-201ENST00000332814 LSMEM2Q8N112 164 aa16.03■□□□□ 0.16
C11orf88-201ENST00000332814 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.03■□□□□ 0.16
C11orf88-201ENST00000332814 GSDMBQ8TAX9 411 aa16.03■□□□□ 0.16
C11orf88-201ENST00000332814 CALML6Q8TD86 181 aa16.03■□□□□ 0.16
C11orf88-201ENST00000332814 NCSTNQ92542 709 aa16.03■□□□□ 0.16
C11orf88-201ENST00000332814 TMEM159Q96B96 161 aa16.03■□□□□ 0.16
C11orf88-201ENST00000332814 SIGLEC10Q96LC7 697 aa16.03■□□□□ 0.16
C11orf88-201ENST00000332814 PANX3Q96QZ0 392 aa16.03■□□□□ 0.16
C11orf88-201ENST00000332814 INSM2Q96T92 566 aaPredicted RBP16.03■□□□□ 0.16
C11orf88-201ENST00000332814 TCF12Q99081 682 aa16.03■□□□□ 0.16
C11orf88-201ENST00000332814 NUDT22Q9BRQ3 303 aa16.03■□□□□ 0.16
C11orf88-201ENST00000332814 TRIM56Q9BRZ2 755 aaKnown RBP16.03■□□□□ 0.16
C11orf88-201ENST00000332814 FAM167BQ9BTA0 163 aa16.03■□□□□ 0.16
C11orf88-201ENST00000332814 TBC1D10AQ9BXI6 508 aa16.03■□□□□ 0.16
C11orf88-201ENST00000332814 DPH5Q9H2P9 285 aa16.03■□□□□ 0.16
C11orf88-201ENST00000332814 SLC40A1Q9NP59 571 aa16.03■□□□□ 0.16
C11orf88-201ENST00000332814 C20orf96Q9NUD7 363 aaPredicted RBP16.03■□□□□ 0.16
C11orf88-201ENST00000332814 CFAP20Q9Y6A4 193 aaKnown RBP16.03■□□□□ 0.16
C11orf88-201ENST00000332814 PTPRBP23467 1997 aa16.02■□□□□ 0.16
C11orf88-201ENST00000332814 RAD51CO43502 376 aa16.02■□□□□ 0.16
C11orf88-201ENST00000332814 UBXN7O94888 489 aa16.02■□□□□ 0.16
C11orf88-201ENST00000332814 MPOP05164 745 aa16.02■□□□□ 0.16
C11orf88-201ENST00000332814 PROS1P07225 676 aa16.02■□□□□ 0.16
C11orf88-201ENST00000332814 IVDP26440 423 aa16.02■□□□□ 0.16
C11orf88-201ENST00000332814 ARNTP27540 789 aa16.02■□□□□ 0.16
C11orf88-201ENST00000332814 RBMS1P29558 406 aaKnown RBP16.02■□□□□ 0.16
C11orf88-201ENST00000332814 PDX1P52945 283 aa16.02■□□□□ 0.16
C11orf88-201ENST00000332814 MRPS25P82663 173 aaKnown RBP16.02■□□□□ 0.16
C11orf88-201ENST00000332814 CYP4F3Q08477 520 aa16.02■□□□□ 0.16
C11orf88-201ENST00000332814 BRD3Q15059 726 aa16.02■□□□□ 0.16
C11orf88-201ENST00000332814 C8orf74Q6P047 294 aa16.02■□□□□ 0.16
C11orf88-201ENST00000332814 TMEM71Q6P5X7 295 aa16.02■□□□□ 0.16
C11orf88-201ENST00000332814 KLHL35Q6PF15 583 aa16.02■□□□□ 0.16
C11orf88-201ENST00000332814 B3GNT8Q7Z7M8 397 aa16.02■□□□□ 0.16
C11orf88-201ENST00000332814 LILRA3Q8N6C8 439 aaPredicted RBP16.02■□□□□ 0.16
C11orf88-201ENST00000332814 OR4D9Q8NGE8 314 aa16.02■□□□□ 0.16
C11orf88-201ENST00000332814 KIF18AQ8NI77 898 aa16.02■□□□□ 0.16
C11orf88-201ENST00000332814 MDM1Q8TC05 714 aa16.02■□□□□ 0.16
C11orf88-201ENST00000332814 LIN37Q96GY3 246 aaPredicted RBP16.02■□□□□ 0.16
C11orf88-201ENST00000332814 RMDN2Q96LZ7 410 aa16.02■□□□□ 0.16
C11orf88-201ENST00000332814 ERP44Q9BS26 406 aa16.02■□□□□ 0.16
C11orf88-201ENST00000332814 TMEM121BQ9BXQ6 578 aaPredicted RBP16.02■□□□□ 0.16
C11orf88-201ENST00000332814 POLR1BQ9H9Y6 1135 aa16.02■□□□□ 0.16
C11orf88-201ENST00000332814 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.02■□□□□ 0.16
C11orf88-201ENST00000332814 SATB2Q9UPW6 733 aa16.02■□□□□ 0.16
C11orf88-201ENST00000332814 H3BMM5 538 aa16.01■□□□□ 0.15
C11orf88-201ENST00000332814 APOA4P06727 396 aa16.01■□□□□ 0.15
C11orf88-201ENST00000332814 JMJD7P0C870 316 aa16.01■□□□□ 0.15
C11orf88-201ENST00000332814 RPS3P23396 243 aaKnown RBP eCLIP16.01■□□□□ 0.15
C11orf88-201ENST00000332814 CSF2RBP32927 897 aa16.01■□□□□ 0.15
C11orf88-201ENST00000332814 RPL21P46778 160 aaKnown RBP16.01■□□□□ 0.15
C11orf88-201ENST00000332814 PREPP48147 710 aa16.01■□□□□ 0.15
C11orf88-201ENST00000332814 ARCN1P48444 511 aaKnown RBP16.01■□□□□ 0.15
C11orf88-201ENST00000332814 CD151P48509 253 aa16.01■□□□□ 0.15
C11orf88-201ENST00000332814 CSE1LP55060 971 aaKnown RBP16.01■□□□□ 0.15
C11orf88-201ENST00000332814 TRA2AQ13595 282 aaKnown RBP eCLIP16.01■□□□□ 0.15
C11orf88-201ENST00000332814 TUBB2AQ13885 445 aa16.01■□□□□ 0.15
C11orf88-201ENST00000332814 CRYMQ14894 314 aa16.01■□□□□ 0.15
C11orf88-201ENST00000332814 RTP5Q14D33 572 aa16.01■□□□□ 0.15
C11orf88-201ENST00000332814 TYSND1Q2T9J0 566 aa16.01■□□□□ 0.15
C11orf88-201ENST00000332814 SPANXN3Q5MJ09 141 aa16.01■□□□□ 0.15
C11orf88-201ENST00000332814 DUS1LQ6P1R4 473 aaKnown RBP16.01■□□□□ 0.15
C11orf88-201ENST00000332814 RAB11FIP2Q7L804 512 aa16.01■□□□□ 0.15
C11orf88-201ENST00000332814 ZNF572Q7Z3I7 529 aaPredicted RBP16.01■□□□□ 0.15
C11orf88-201ENST00000332814 PLXDC1Q8IUK5 500 aa16.01■□□□□ 0.15
C11orf88-201ENST00000332814 SLITRK4Q8IW52 837 aa16.01■□□□□ 0.15
C11orf88-201ENST00000332814 FBXO39Q8N4B4 442 aa16.01■□□□□ 0.15
C11orf88-201ENST00000332814 MNS1Q8NEH6 495 aa16.01■□□□□ 0.15
C11orf88-201ENST00000332814 SPDYE1Q8NFV5 336 aaPredicted RBP16.01■□□□□ 0.15
C11orf88-201ENST00000332814 GPR150Q8NGU9 434 aa16.01■□□□□ 0.15
C11orf88-201ENST00000332814 ASZ1Q8WWH4 475 aa16.01■□□□□ 0.15
C11orf88-201ENST00000332814 LRRC39Q96DD0 335 aa16.01■□□□□ 0.15
C11orf88-201ENST00000332814 CFAP36Q96G28 342 aa16.01■□□□□ 0.15
C11orf88-201ENST00000332814 CCDC74BQ96LY2 380 aa16.01■□□□□ 0.15
C11orf88-201ENST00000332814 FCRL3Q96P31 734 aaPredicted RBP16.01■□□□□ 0.15
C11orf88-201ENST00000332814 FERD3LQ96RJ6 166 aa16.01■□□□□ 0.15
C11orf88-201ENST00000332814 CMKLR1Q99788 373 aa16.01■□□□□ 0.15
C11orf88-201ENST00000332814 EBNA1BP2Q99848 306 aaKnown RBP16.01■□□□□ 0.15
C11orf88-201ENST00000332814 TUBB2BQ9BVA1 445 aa16.01■□□□□ 0.15
C11orf88-201ENST00000332814 CARD6Q9BX69 1037 aa16.01■□□□□ 0.15
C11orf88-201ENST00000332814 CCDC68Q9H2F9 335 aa16.01■□□□□ 0.15
C11orf88-201ENST00000332814 INTS10Q9NVR2 710 aaKnown RBP16.01■□□□□ 0.15
C11orf88-201ENST00000332814 IL1RAPL1Q9NZN1 696 aa16.01■□□□□ 0.15
C11orf88-201ENST00000332814 ZC3H7BQ9UGR2 993 aaKnown RBP16.01■□□□□ 0.15
C11orf88-201ENST00000332814 LOXL2Q9Y4K0 774 aa16.01■□□□□ 0.15
C11orf88-201ENST00000332814 ZCWPW2A0A1B0GU75 182 aa16■□□□□ 0.15
C11orf88-201ENST00000332814 E5RI56 91 aa16■□□□□ 0.15
C11orf88-201ENST00000332814 AGRPO00253 132 aa16■□□□□ 0.15
C11orf88-201ENST00000332814 KPNA5O15131 536 aa16■□□□□ 0.15
C11orf88-201ENST00000332814 BANF1O75531 89 aa16■□□□□ 0.15
C11orf88-201ENST00000332814 ESR1P03372 595 aa16■□□□□ 0.15
C11orf88-201ENST00000332814 TYRP1P17643 537 aa16■□□□□ 0.15
C11orf88-201ENST00000332814 MPSTP25325 297 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms