RNA–Protein interactions for RNA: ENST00000331194.8

CCDC88C-201, Transcript of coiled-coil domain containing 88C, humanhuman

TSL 5 BASIC

Gene CCDC88C, Length 3,104 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88C-201ENST00000331194 SLC38A6Q8IZM9 456 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 PJA1Q8NG27 643 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 SLC10A4Q96EP9 437 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 ZNF560Q96MR9 790 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 YME1L1Q96TA2 773 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 MED10Q9BTT4 135 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 COLEC11Q9BWP8 271 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 WDCPQ9H6R7 721 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 AMBNQ9NP70 447 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 COMMD8Q9NX08 183 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 MAGEL2Q9UJ55 1249 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 ASB1Q9Y576 335 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 STAU1O95793 577 aaKnown RBP13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 MLYCDO95822 493 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 S1PR4O95977 384 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 GGT1P19440 569 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 TGFBR2P37173 567 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 CLCN5P51795 746 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 SLC35A2P78381 396 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 ZNF404Q494X3 552 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 ATP6AP1LQ52LC2 224 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 SYVN1Q86TM6 617 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 UNC93AQ86WB7 457 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 LACC1Q8IV20 430 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 FBXO16Q8IX29 292 aaPredicted RBP13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 PHACTR4Q8IZ21 702 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 CRYBG2Q8N1P7 616 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 RNF34Q969K3 372 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 NEDD4LQ96PU5 975 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 VAT1Q99536 393 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 RBM4BQ9BQ04 359 aaKnown RBP13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 THUMPD3Q9BV44 507 aaKnown RBP13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 RBM4Q9BWF3 364 aaKnown RBP13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 ACOT13Q9NPJ3 140 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 PDGFCQ9NRA1 345 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 SMPD4Q9NXE4 827 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 FBXL12Q9NXK8 326 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 GALPQ9UBC7 116 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 ZNF221Q9UK13 617 aa13.26□□□□□ -0.29
CCDC88C-201ENST00000331194 PDZK1P1A8MUH7 402 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 ARVCFO00192 962 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 SCO2O43819 266 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 TULP3O75386 442 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 DIRAS1O95057 198 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 PAPSS2O95340 614 aaPredicted RBP13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 HOXD8P13378 290 aaPredicted RBP13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 ZNF37AP17032 561 aaPredicted RBP13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 FCGRTP55899 365 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 WNT3AP56704 352 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 MVKQ03426 396 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 TRAF3Q13114 568 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 Q5BKY6 102 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 CEP78Q5JTW2 689 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 RANBP10Q6VN20 620 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 CLEC20AQ6ZU45 233 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 AHSA2Q719I0 299 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 TP53I13Q8NBR0 393 aaPredicted RBP13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 DUSP16Q9BY84 665 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 TRMT13Q9NUP7 481 aaKnown RBP13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 PARP14Q460N5 1801 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 A0A0U1RQS6 177 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 LOC100506127A0A0U1RQW1 187 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 LOC105371267A0A1B0GV96 52 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 ASB14A6NK59 587 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 H0Y626 953 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 GAS2O43903 313 aaKnown RBP13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 TRIM16O95361 564 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 CYP11A1P05108 521 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 UBL4AP11441 157 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 DDX5P17844 614 aaKnown RBP13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 GRK5P34947 590 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 SCNN1AP37088 669 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 GALK2Q01415 458 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 IHHQ14623 411 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 ACOX1Q15067 660 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 TPRG1LQ5T0D9 272 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 SYT6Q5T7P8 510 aaPredicted RBP13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 ZCCHC8Q6NZY4 707 aaKnown RBP13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 NECAB2Q7Z6G3 386 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 GPC2Q8N158 579 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 B3GALNT2Q8NCR0 500 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 RHBDF1Q96CC6 855 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 SLC2A13Q96QE2 648 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 BEX2Q9BXY8 128 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 SLC39A8Q9C0K1 460 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 TNKS2Q9H2K2 1166 aa13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 PAQR5Q9NXK6 330 aaPredicted RBP13.25□□□□□ -0.29
CCDC88C-201ENST00000331194 SLC12A8A0AV02 714 aa13.24□□□□□ -0.29
CCDC88C-201ENST00000331194 FAM172BPA6NC97 362 aa13.24□□□□□ -0.29
CCDC88C-201ENST00000331194 KMOO15229 486 aa13.24□□□□□ -0.29
CCDC88C-201ENST00000331194 GJB3O75712 270 aa13.24□□□□□ -0.29
CCDC88C-201ENST00000331194 RECQL5O94762 991 aaPredicted RBP13.24□□□□□ -0.29
CCDC88C-201ENST00000331194 PIRTP0C851 137 aa13.24□□□□□ -0.29
CCDC88C-201ENST00000331194 G6PDP11413 515 aa13.24□□□□□ -0.29
CCDC88C-201ENST00000331194 OR2B6P58173 313 aa13.24□□□□□ -0.29
CCDC88C-201ENST00000331194 ITKQ08881 620 aa13.24□□□□□ -0.29
CCDC88C-201ENST00000331194 TOP3AQ13472 1001 aaPredicted RBP13.24□□□□□ -0.29
CCDC88C-201ENST00000331194 COQ5Q5HYK3 327 aa13.24□□□□□ -0.29
CCDC88C-201ENST00000331194 KIAA0319Q5VV43 1072 aa13.24□□□□□ -0.29
CCDC88C-201ENST00000331194 AGAP6Q5VW22 663 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms