RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	SNX20	Q7Z614	316 aa		11.66	□□□□□ -0.54
DDR1-223	ENST00000324771	EID3	Q8N140	333 aa		11.66	□□□□□ -0.54
DDR1-223	ENST00000324771	ITFG2	Q969R8	447 aa		11.66	□□□□□ -0.54
DDR1-223	ENST00000324771	PPP1R16A	Q96I34	528 aa		11.66	□□□□□ -0.54
DDR1-223	ENST00000324771	TMEM175	Q9BSA9	504 aa		11.66	□□□□□ -0.54
DDR1-223	ENST00000324771	MYRF	Q9Y2G1	1151 aa		11.66	□□□□□ -0.54
DDR1-223	ENST00000324771	COL6A1	P12109	1028 aa		11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	INPP1	P49441	399 aa		11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	SULT2A1	Q06520	285 aa		11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	SIM2	Q14190	667 aa	Predicted RBP	11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	TGFBI	Q15582	683 aa		11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	SLC2A7	Q6PXP3	512 aa		11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	OR4F6	Q8NGB9	312 aa		11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	BAD	Q92934	168 aa		11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	CLIP3	Q96DZ5	547 aa		11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	MPP4	Q96JB8	637 aa		11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	FERD3L	Q96RJ6	166 aa		11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	C9orf16	Q9BUW7	83 aa		11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	GIMAP4	Q9NUV9	329 aa		11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	BRWD3	Q6RI45	1802 aa		11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	C15orf38-AP3S2	A0A0A6YYH1	394 aa		11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	PLK4	O00444	970 aa		11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	TGM5	O43548	720 aa		11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	MMP20	O60882	483 aa		11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	TNFAIP8	O95379	198 aa		11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	JUN	P05412	331 aa	Known RBP	11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	SLC35G4	P0C7Q5	338 aa		11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	DDX5	P17844	614 aa	Known RBP	11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	HNF1B	P35680	557 aa		11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	TAZ	Q16635	292 aa		11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	CYP2A13	Q16696	494 aa		11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	MYLK3	Q32MK0	819 aa		11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	RSPO2	Q6UXX9	243 aa	Predicted RBP	11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	MTSS1L	Q765P7	747 aa		11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	ARPIN	Q7Z6K5	226 aa		11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	OR52B6	Q8NGF0	335 aa		11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	CLSTN3	Q9BQT9	956 aa		11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	TFB2M	Q9H5Q4	396 aa	Known RBP	11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	INTS10	Q9NVR2	710 aa	Known RBP	11.65	□□□□□ -0.54
DDR1-223	ENST00000324771	SH3GLB1	Q9Y371	365 aa		11.65	□□□□□ -0.54
DDR1-223	ENST00000324771		H3BN98	237 aa		11.65	□□□□□ -0.55
DDR1-223	ENST00000324771	TRIM24	O15164	1050 aa		11.65	□□□□□ -0.55
DDR1-223	ENST00000324771	TRBC1	P01850	177 aa		11.65	□□□□□ -0.55
DDR1-223	ENST00000324771	ATF6	P18850	670 aa		11.65	□□□□□ -0.55
DDR1-223	ENST00000324771	PPIG	Q13427	754 aa	Known RBP eCLIP	11.65	□□□□□ -0.55	2e-6	■■■□□ 16.6
DDR1-223	ENST00000324771	GRM2	Q14416	872 aa		11.65	□□□□□ -0.55
DDR1-223	ENST00000324771	STEAP4	Q687X5	459 aa		11.65	□□□□□ -0.55
DDR1-223	ENST00000324771	GDPD4	Q6W3E5	623 aa		11.65	□□□□□ -0.55
DDR1-223	ENST00000324771	PLD3	Q8IV08	490 aa		11.65	□□□□□ -0.55
DDR1-223	ENST00000324771	NACC2	Q96BF6	587 aa		11.65	□□□□□ -0.55
DDR1-223	ENST00000324771	ZNF599	Q96NL3	588 aa		11.65	□□□□□ -0.55
DDR1-223	ENST00000324771	UGT2B28	Q9BY64	529 aa		11.65	□□□□□ -0.55
DDR1-223	ENST00000324771	CSNK1G1	Q9HCP0	422 aa		11.65	□□□□□ -0.55
DDR1-223	ENST00000324771	MTRR	Q9UBK8	725 aa		11.65	□□□□□ -0.55
DDR1-223	ENST00000324771	RAPGEFL1	Q9UHV5	662 aa		11.65	□□□□□ -0.55
DDR1-223	ENST00000324771	EMCN	Q9ULC0	261 aa		11.65	□□□□□ -0.55
DDR1-223	ENST00000324771	RAB23	Q9ULC3	237 aa		11.65	□□□□□ -0.55
DDR1-223	ENST00000324771	ZNF510	Q9Y2H8	683 aa		11.65	□□□□□ -0.55
DDR1-223	ENST00000324771	USP3	Q9Y6I4	520 aa		11.65	□□□□□ -0.55
DDR1-223	ENST00000324771	DGKB	Q9Y6T7	804 aa		11.65	□□□□□ -0.55
DDR1-223	ENST00000324771	COL24A1	Q17RW2	1714 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	DOCK5	Q9H7D0	1870 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	MUSK	O15146	869 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	ATG13	O75143	517 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	RHO	P08100	348 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	FCGR1A	P12314	374 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	MYCLP1	P12525	358 aa	Predicted RBP	11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	CCNF	P41002	786 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	NRIP1	P48552	1158 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	FPGS	Q05932	587 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	GPM6B	Q13491	265 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	ADCK1	Q86TW2	530 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	OR52J3	Q8NH60	311 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	PLEKHA8	Q96JA3	519 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	CASD1	Q96PB1	797 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	MIR1-1HG	Q9H1L0	117 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	COQ10B	Q9H8M1	238 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	RNF11	Q9Y3C5	154 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	SDHD	O14521	159 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	KIR3DL1	P43629	444 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	CREM	Q03060	361 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	MBTPS1	Q14703	1052 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	OR4D1	Q15615	310 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	PTCHD3	Q3KNS1	767 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	RAB41	Q5JT25	222 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	REM2	Q8IYK8	340 aa	Predicted RBP	11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	AURKB	Q96GD4	344 aa	Predicted RBP	11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	CCDC3	Q9BQI4	270 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	VPS4A	Q9UN37	437 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	MYOCOS	A0A1B0GUC4	107 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	KLHL33	A6NCF5	533 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771		I6L893	689 aa	Predicted RBP	11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	SLC28A1	O00337	649 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	MAN1A2	O60476	641 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	KERA	O60938	352 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	LYN	P07948	512 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	ANXA4	P09525	319 aa	Predicted RBP	11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	G6PD	P11413	515 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	UQCRB	P14927	111 aa		11.64	□□□□□ -0.55
DDR1-223	ENST00000324771	GABRB3	P28472	473 aa		11.64	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms