RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 LAMB3Q13751 1172 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 GPR19Q15760 415 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 CYB5D1Q6P9G0 228 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 RANBP10Q6VN20 620 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 BBS12Q6ZW61 710 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 DAAM2Q86T65 1068 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 BPHLQ86WA6 291 aaPredicted RBP17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 KMT5CQ86Y97 462 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 CCDC50Q8IVM0 306 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 APLFQ8IW19 511 aaPredicted RBP17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 LILRA3Q8N6C8 439 aaPredicted RBP17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 TEX19Q8NA77 164 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 OR4K2Q8NGD2 314 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 OR2L2Q8NH16 312 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 C12orf66Q96MD2 445 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 CD180Q99467 661 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 FSD1LQ9BXM9 530 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 FAM8A1Q9UBU6 413 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 SLC24A2Q9UI40 661 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 FKBPLQ9UIM3 349 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 ACSL5Q9ULC5 683 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 MAN2B2Q9Y2E5 1009 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 PIKFYVEQ9Y2I7 2098 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 AKR1B15C9JRZ8 316 aaPredicted RBP17.02■□□□□ 0.32
EXOSC4-201ENST00000316052 LPOP22079 712 aaPredicted RBP17.02■□□□□ 0.32
EXOSC4-201ENST00000316052 PTPN4P29074 926 aa17.02■□□□□ 0.32
EXOSC4-201ENST00000316052 ADRA1AP35348 466 aa17.02■□□□□ 0.32
EXOSC4-201ENST00000316052 ARCN1P48444 511 aaKnown RBP17.02■□□□□ 0.32
EXOSC4-201ENST00000316052 ARL4DP49703 201 aa17.02■□□□□ 0.32
EXOSC4-201ENST00000316052 KPNA2P52292 529 aaKnown RBP17.02■□□□□ 0.32
EXOSC4-201ENST00000316052 TUBB4BP68371 445 aa17.02■□□□□ 0.32
EXOSC4-201ENST00000316052 XIAPP98170 497 aa17.02■□□□□ 0.32
EXOSC4-201ENST00000316052 MSLNQ13421 630 aaPredicted RBP17.02■□□□□ 0.32
EXOSC4-201ENST00000316052 TUBB2AQ13885 445 aa17.02■□□□□ 0.32
EXOSC4-201ENST00000316052 CNGA4Q8IV77 575 aa17.02■□□□□ 0.32
EXOSC4-201ENST00000316052 SLC38A9Q8NBW4 561 aa17.02■□□□□ 0.32
EXOSC4-201ENST00000316052 ZFPM2Q8WW38 1151 aa17.02■□□□□ 0.32
EXOSC4-201ENST00000316052 RMDN2Q96LZ7 410 aa17.02■□□□□ 0.32
EXOSC4-201ENST00000316052 APOL2Q9BQE5 337 aa17.02■□□□□ 0.32
EXOSC4-201ENST00000316052 TUBB2BQ9BVA1 445 aa17.02■□□□□ 0.32
EXOSC4-201ENST00000316052 GPR87Q9BY21 358 aa17.02■□□□□ 0.32
EXOSC4-201ENST00000316052 GBA3Q9H227 469 aa17.02■□□□□ 0.32
EXOSC4-201ENST00000316052 ASB8Q9H765 288 aa17.02■□□□□ 0.32
EXOSC4-201ENST00000316052 KIR3DX1Q9H7L2 352 aa17.02■□□□□ 0.32
EXOSC4-201ENST00000316052 NOTCH2Q04721 2471 aa17.02■□□□□ 0.31
EXOSC4-201ENST00000316052 H7C0C1 242 aa17.01■□□□□ 0.31
EXOSC4-201ENST00000316052 SRP72O76094 671 aaKnown RBP17.01■□□□□ 0.31
EXOSC4-201ENST00000316052 POLBP06746 335 aa17.01■□□□□ 0.31
EXOSC4-201ENST00000316052 ATP5OP48047 213 aa17.01■□□□□ 0.31
EXOSC4-201ENST00000316052 CD97P48960 835 aa17.01■□□□□ 0.31
EXOSC4-201ENST00000316052 GEMP55040 296 aa17.01■□□□□ 0.31
EXOSC4-201ENST00000316052 GPS2Q13227 327 aa17.01■□□□□ 0.31
EXOSC4-201ENST00000316052 IL10RAQ13651 578 aa17.01■□□□□ 0.31
EXOSC4-201ENST00000316052 ESPL1Q14674 2120 aa17.01■□□□□ 0.31
EXOSC4-201ENST00000316052 TAF1AQ15573 450 aaPredicted RBP17.01■□□□□ 0.31
EXOSC4-201ENST00000316052 UGT8Q16880 541 aa17.01■□□□□ 0.31
EXOSC4-201ENST00000316052 BCL7AQ4VC05 210 aa17.01■□□□□ 0.31
EXOSC4-201ENST00000316052 PRAMEF17Q5VTA0 474 aa17.01■□□□□ 0.31
EXOSC4-201ENST00000316052 CAPRIN2Q6IMN6 1127 aaKnown RBP17.01■□□□□ 0.31
EXOSC4-201ENST00000316052 LCN10Q6JVE6 187 aa17.01■□□□□ 0.31
EXOSC4-201ENST00000316052 OOSP2Q86WS3 158 aa17.01■□□□□ 0.31
EXOSC4-201ENST00000316052 CFAP206Q8IYR0 622 aa17.01■□□□□ 0.31
EXOSC4-201ENST00000316052 RNF214Q8ND24 703 aa17.01■□□□□ 0.31
EXOSC4-201ENST00000316052 ZNF501Q96CX3 271 aaPredicted RBP17.01■□□□□ 0.31
EXOSC4-201ENST00000316052 NRTNQ99748 197 aa17.01■□□□□ 0.31
EXOSC4-201ENST00000316052 KCND1Q9NSA2 647 aa17.01■□□□□ 0.31
EXOSC4-201ENST00000316052 FARSAQ9Y285 508 aaKnown RBP17.01■□□□□ 0.31
EXOSC4-201ENST00000316052 C5orf60A6NFR6 353 aa17■□□□□ 0.31
EXOSC4-201ENST00000316052 C2orf81A6NN90 581 aa17■□□□□ 0.31
EXOSC4-201ENST00000316052 AGAP14A8MT82 685 aa17■□□□□ 0.31
EXOSC4-201ENST00000316052 APOC4-APOC2K7ER74 178 aa17■□□□□ 0.31
EXOSC4-201ENST00000316052 DDX3YO15523 660 aaKnown RBP17■□□□□ 0.31
EXOSC4-201ENST00000316052 SCRG1O75711 98 aa17■□□□□ 0.31
EXOSC4-201ENST00000316052 ANXA9O76027 345 aa17■□□□□ 0.31
EXOSC4-201ENST00000316052 LCA5LO95447 670 aa17■□□□□ 0.31
EXOSC4-201ENST00000316052 ZBTB11O95625 1053 aaPredicted RBP17■□□□□ 0.31
EXOSC4-201ENST00000316052 APOC2P02655 101 aa17■□□□□ 0.31
EXOSC4-201ENST00000316052 POLR2CP19387 275 aaPredicted RBP17■□□□□ 0.31
EXOSC4-201ENST00000316052 CHAF1BQ13112 559 aa17■□□□□ 0.31
EXOSC4-201ENST00000316052 CPZQ66K79 652 aa17■□□□□ 0.31
EXOSC4-201ENST00000316052 ZNF517Q6ZMY9 492 aaPredicted RBP17■□□□□ 0.31
EXOSC4-201ENST00000316052 MICALCLQ6ZW33 695 aa17■□□□□ 0.31
EXOSC4-201ENST00000316052 TC2NQ8N9U0 490 aa17■□□□□ 0.31
EXOSC4-201ENST00000316052 OR4E2Q8NGC2 313 aa17■□□□□ 0.31
EXOSC4-201ENST00000316052 OR13C4Q8NGS5 318 aa17■□□□□ 0.31
EXOSC4-201ENST00000316052 MR1Q95460 341 aa17■□□□□ 0.31
EXOSC4-201ENST00000316052 RBM41Q96IZ5 413 aaKnown RBP17■□□□□ 0.31
EXOSC4-201ENST00000316052 LINC00615Q96LM1 132 aaPredicted RBP17■□□□□ 0.31
EXOSC4-201ENST00000316052 FAM96AQ9H5X1 160 aa17■□□□□ 0.31
EXOSC4-201ENST00000316052 CCDC88CQ9P219 2028 aa17■□□□□ 0.31
EXOSC4-201ENST00000316052 PCDHA13Q9Y5I0 950 aa17■□□□□ 0.31
EXOSC4-201ENST00000316052 SHANK1Q9Y566 2161 aa16.99■□□□□ 0.31
EXOSC4-201ENST00000316052 CENPEQ02224 2701 aa16.99■□□□□ 0.31
EXOSC4-201ENST00000316052 SLC9B1P1A6NJY1 282 aa16.99■□□□□ 0.31
EXOSC4-201ENST00000316052 CPNE3O75131 537 aaKnown RBP16.99■□□□□ 0.31
EXOSC4-201ENST00000316052 SLC35G4P0C7Q5 338 aa16.99■□□□□ 0.31
EXOSC4-201ENST00000316052 PSMB4P28070 264 aa16.99■□□□□ 0.31
EXOSC4-201ENST00000316052 RPS15P62841 145 aaKnown RBP16.99■□□□□ 0.31
EXOSC4-201ENST00000316052 GSE1Q14687 1217 aa16.99■□□□□ 0.31
EXOSC4-201ENST00000316052 ANKRD20A2Q5SQ80 823 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms