RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 GAPDHSO14556 408 aaPredicted RBP7.5□□□□□ -1.21
TRIM55-202ENST00000315962 ACOT8O14734 319 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 INPP4BO15327 924 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 LINC01565O15544 149 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 B4GAT1O43505 415 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 PKMP14618 531 aaKnown RBP7.5□□□□□ -1.21
TRIM55-202ENST00000315962 CD247P20963 164 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 SERPINA4P29622 427 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 ETV3P41162 512 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 CASP2P42575 452 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 SLC7A2P52569 658 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 HK3P52790 923 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 PRKAA2P54646 552 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 NAA20P61599 178 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 PLIN5Q00G26 463 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 PFKPQ01813 784 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 ATP1A4Q13733 1029 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 PLCL1Q15111 1095 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 TCEA2Q15560 299 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 NEDD8Q15843 81 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 UNC50Q53HI1 259 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 ZNF678Q5SXM1 525 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 ACBD5Q5T8D3 534 aaPredicted RBP7.5□□□□□ -1.21
TRIM55-202ENST00000315962 OGFOD2Q6N063 350 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 C22orf39Q6P5X5 142 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 PGAM4Q8N0Y7 254 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 VN1R2Q8NFZ6 395 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 OR52B6Q8NGF0 335 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 CANT1Q8WVQ1 401 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 CYGBQ8WWM9 190 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 NXPE3Q969Y0 559 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 SLCO4A1Q96BD0 722 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 ZNF707Q96C28 371 aaPredicted RBP7.5□□□□□ -1.21
TRIM55-202ENST00000315962 FBXL8Q96CD0 374 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 CEP295NLQ96MC4 621 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 PBX4Q9BYU1 374 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 BRD9Q9H8M2 597 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 ZBTB26Q9HCK0 441 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 DUS2Q9NX74 493 aaKnown RBP7.5□□□□□ -1.21
TRIM55-202ENST00000315962 RSL24D1Q9UHA3 163 aaKnown RBP7.5□□□□□ -1.21
TRIM55-202ENST00000315962 TRMT6Q9UJA5 497 aaKnown RBP7.5□□□□□ -1.21
TRIM55-202ENST00000315962 CNOT6Q9ULM6 557 aaKnown RBP7.5□□□□□ -1.21
TRIM55-202ENST00000315962 USP22Q9UPT9 525 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 GOLGA4Q13439 2230 aaKnown RBP7.5□□□□□ -1.21
TRIM55-202ENST00000315962 SDK1Q7Z5N4 2213 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 GLYATL1P3A0A0U1RQE8 302 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 A0A1W2PQ67 120 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 PRRT4C9JH25 899 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 KPNA3O00505 521 aaPredicted RBP7.49□□□□□ -1.21
TRIM55-202ENST00000315962 FBP2O00757 339 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 IGSF6O95976 241 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 CTSLP07711 333 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 RBP1P09455 135 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 COL6A2P12110 1019 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 NCK1P16333 377 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 ATP6V1B2P21281 511 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 SNRPD1P62314 119 aaKnown RBP7.49□□□□□ -1.21
TRIM55-202ENST00000315962 RAD51Q06609 339 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 PRKAA1Q13131 559 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 DCTN2Q13561 401 aaKnown RBP7.49□□□□□ -1.21
TRIM55-202ENST00000315962 APOFQ13790 326 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 AAK1Q2M2I8 961 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 ARHGAP15Q53QZ3 475 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 FAM78AQ5JUQ0 283 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 PSRC1Q6PGN9 363 aaPredicted RBP7.49□□□□□ -1.21
TRIM55-202ENST00000315962 SERPINA13PQ6UXR4 307 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 UTS2BQ765I0 119 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 RP9Q8TA86 221 aaKnown RBP7.49□□□□□ -1.21
TRIM55-202ENST00000315962 GABPB2Q8TAK5 448 aaPredicted RBP7.49□□□□□ -1.21
TRIM55-202ENST00000315962 CD200R1Q8TD46 325 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 PBXIP1Q96AQ6 731 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 CLPBQ9H078 707 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 GSTO2Q9H4Y5 243 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 SUV39H2Q9H5I1 410 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 NSUN3Q9H649 340 aaKnown RBP7.49□□□□□ -1.21
TRIM55-202ENST00000315962 STN1Q9H668 368 aaKnown RBP7.49□□□□□ -1.21
TRIM55-202ENST00000315962 EFCAB1Q9HAE3 211 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 B4GALT6Q9UBX8 382 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 EIF2B4Q9UI10 523 aaKnown RBP7.49□□□□□ -1.21
TRIM55-202ENST00000315962 SARDHQ9UL12 918 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 RAB26Q9ULW5 256 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 TRAF6Q9Y4K3 522 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 PCDHGA7Q9Y5G6 932 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 DNAJC15Q9Y5T4 150 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 TNRC18O15417 2968 aaPredicted RBP7.49□□□□□ -1.21
TRIM55-202ENST00000315962 ANAPC1Q9H1A4 1944 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 A0A1W2PPW3 197 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 NR5A2O00482 541 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 SDHDO14521 159 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 ZSCAN9O15535 394 aaPredicted RBP7.49□□□□□ -1.21
TRIM55-202ENST00000315962 VPS26AO75436 327 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 BCAS2O75934 225 aaPredicted RBP7.49□□□□□ -1.21
TRIM55-202ENST00000315962 CDK14O94921 469 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 APOA4P06727 396 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 MTHFD1P11586 935 aaKnown RBP7.49□□□□□ -1.21
TRIM55-202ENST00000315962 POLR2EP19388 210 aaKnown RBP7.49□□□□□ -1.21
TRIM55-202ENST00000315962 TTPAP49638 278 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 VASPP50552 380 aaPredicted RBP7.49□□□□□ -1.21
TRIM55-202ENST00000315962 IL2P60568 153 aa7.49□□□□□ -1.21
TRIM55-202ENST00000315962 CD300CQ08708 224 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms