RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 ZMPSTE24O75844 475 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 ALDH1A2O94788 518 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 B3GALT4O96024 378 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 BPIP17213 487 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 NCF2P19878 526 aaPredicted RBP4.87□□□□□ -1.63
CAST-201ENST00000309190 BCKDHBP21953 392 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 P2RY2P41231 377 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 AGTR2P50052 363 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 TPMTP51580 245 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 CLCNKAP51800 687 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 RAB15P59190 212 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 CRY1Q16526 586 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 CPSF6Q16630 551 aaKnown RBP eCLIP4.87□□□□□ -1.63
CAST-201ENST00000309190 DEFB110Q30KQ9 67 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 TAF1BQ53T94 588 aaPredicted RBP4.87□□□□□ -1.63
CAST-201ENST00000309190 RNF220Q5VTB9 566 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 ZNF449Q6P9G9 518 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 ATCAYQ86WG3 371 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 DDIASQ8IXT1 998 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 AADATQ8N5Z0 425 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 TRMT2BQ96GJ1 504 aaKnown RBP4.87□□□□□ -1.63
CAST-201ENST00000309190 MAGED4Q96JG8 741 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 FCRL4Q96PJ5 515 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 NR1H4Q96RI1 486 aaPredicted RBP4.87□□□□□ -1.63
CAST-201ENST00000309190 SORT1Q99523 831 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 BTBD10Q9BSF8 475 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 COL25A1Q9BXS0 654 aaPredicted RBP4.87□□□□□ -1.63
CAST-201ENST00000309190 RBCK1Q9BYM8 510 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.87□□□□□ -1.63
CAST-201ENST00000309190 DCLRE1BQ9H816 532 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 DZANK1Q9NVP4 752 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 BTRCQ9Y297 605 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 NCKAP1Q9Y2A7 1128 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 PRSS21Q9Y6M0 314 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 GSAPA4D1B5 854 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 C5orf67F2Z3F1 127 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 ZBTB14O43829 449 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 PRLP01236 227 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 FCARP24071 287 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 PPP3CCP48454 512 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 SEMA3BQ13214 749 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 PEX6Q13608 980 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 CCNIQ14094 377 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 PAFAH1B3Q15102 231 aaKnown RBP4.87□□□□□ -1.63
CAST-201ENST00000309190 TSNQ15631 228 aaKnown RBP4.87□□□□□ -1.63
CAST-201ENST00000309190 N4BP2L1Q5TBK1 243 aaPredicted RBP4.87□□□□□ -1.63
CAST-201ENST00000309190 CCDC81Q6ZN84 652 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 FAM129CQ86XR2 697 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 TRIM48Q8IWZ4 208 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 CLHC1Q8NHS4 586 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 ACDQ96AP0 544 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 ERP27Q96DN0 273 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 SIGLEC10Q96LC7 697 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 TSPAN18Q96SJ8 248 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 OXCT2Q9BYC2 517 aaPredicted RBP4.87□□□□□ -1.63
CAST-201ENST00000309190 CATSPERZQ9NTU4 200 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 MRGBPQ9NV56 204 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 ZNF180Q9UJW8 692 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 LRCH1Q9Y2L9 728 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 ZNF711Q9Y462 761 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 NPEPPSL1A6NEC2 478 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 K7EQS6 105 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 TSPAN6O43657 245 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 GREM1O60565 184 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 SNUPNO95149 360 aaKnown RBP4.86□□□□□ -1.63
CAST-201ENST00000309190 IGLV3-25P01717 112 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 ADRB3P13945 408 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 TIMP2P16035 220 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 EPB42P16452 691 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 ITGALP20701 1170 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 MSX2P35548 267 aaPredicted RBP4.86□□□□□ -1.63
CAST-201ENST00000309190 CXCL12P48061 93 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 RNF144AP50876 292 aaPredicted RBP4.86□□□□□ -1.63
CAST-201ENST00000309190 NEK2P51955 445 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 BNIP3Q12983 259 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 CDKN3Q16667 212 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 HNRNPA1L2Q32P51 320 aaKnown RBP4.86□□□□□ -1.63
CAST-201ENST00000309190 CCSMST1Q4G0I0 132 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 TIFABQ6ZNK6 161 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 SHISA6Q6ZSJ9 500 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 CEP97Q8IW35 865 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 RNF148Q8N7C7 305 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 OR4E2Q8NGC2 313 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 EEF1AKMT1Q8WVE0 214 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 SLC6A18Q96N87 628 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 TDRD1Q9BXT4 1180 aaKnown RBP4.86□□□□□ -1.63
CAST-201ENST00000309190 TMEM168Q9H0V1 697 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 IL21RQ9HBE5 538 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 NPHS2Q9NP85 383 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 PRDM8Q9NQV8 689 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 STARD5Q9NSY2 213 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 NCDNQ9UBB6 729 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 LHX3Q9UBR4 397 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 WASF2Q9Y6W5 498 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 LRRK2Q5S007 2527 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 DOCK4Q8N1I0 1966 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 A0A1B0GVT2 93 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 BCLAF3A2AJT9 711 aaKnown RBP4.86□□□□□ -1.63
CAST-201ENST00000309190 C1QTNF3-AMACRE9PGA6 284 aa4.86□□□□□ -1.63
CAST-201ENST00000309190 KRT37O76014 449 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms