RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 APOA4P06727 396 aa10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 MTHFD1P11586 935 aaKnown RBP10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 XRCC1P18887 633 aaPredicted RBP10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 FMO4P31512 558 aa10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 MAPK9P45984 424 aa10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 UBE2IP63279 158 aaKnown RBP10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CCL7P80098 99 aa10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 RPA4Q13156 261 aa10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 NR1D2Q14995 579 aa10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 BRD3Q15059 726 aa10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 PLCL1Q15111 1095 aa10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 AMZ1Q400G9 498 aa10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 HSP90AA5PQ58FG0 334 aa10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 UNC5AQ6ZN44 842 aa10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 TMPRSS7Q7RTY8 843 aa10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 ZNF761Q86XN6 746 aaPredicted RBP10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 NOA1Q8NC60 698 aaKnown RBP10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 OR10G6Q8NH81 332 aa10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 FBXO25Q8TCJ0 367 aa10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 SCNM1Q9BWG6 230 aa10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 FAM129AQ9BZQ8 928 aa10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 FOXP3Q9BZS1 431 aa10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 FBXO6Q9NRD1 293 aaPredicted RBP10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 SCHIP1Q9P0W5 487 aaPredicted RBP10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 RABGEF1Q9UJ41 708 aa10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CRYL1Q9Y2S2 319 aa10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 NEUROG3Q9Y4Z2 214 aa10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 DCHS1Q96JQ0 3298 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 ESYT3A0FGR9 886 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 LILRA5A6NI73 299 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 ESPNB1AK53 854 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 D6RAR5 112 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 KPNA5O15131 536 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 PPM1DO15297 605 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 ESR1P03372 595 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 ERVK-10P10266 1014 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 BRAFP15056 766 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 NDUFS1P28331 727 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 SLC19A1P41440 591 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 PREPP48147 710 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 EPHA4P54764 986 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CSE1LP55060 971 aaKnown RBP10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 ADARP55265 1226 aaKnown RBP10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 OR1D5P58170 312 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CTBP1Q13363 440 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CLCA4Q14CN2 919 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 FASTKD3Q14CZ7 662 aaKnown RBP10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 RPE65Q16518 533 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CLPPQ16740 277 aaPredicted RBP10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 STEAP4Q687X5 459 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CAPN12Q6ZSI9 719 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 TMEM26Q6ZUK4 368 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 OTOAQ7RTW8 1153 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 PDZD3Q86UT5 571 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 DENND6AQ8IWF6 608 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 PALM2Q8IXS6 379 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 LILRA3Q8N6C8 439 aaPredicted RBP10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 ASZ1Q8WWH4 475 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 LPGAT1Q92604 370 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 RMDN2Q96LZ7 410 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 TMEM74Q96NL1 305 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 DPYSL5Q9BPU6 564 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 P2RY12Q9H244 342 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 EPB41L1Q9H4G0 881 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 UCK1Q9HA47 277 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 ZFATQ9P243 1243 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 KLK13Q9UKR3 277 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 FBXO5Q9UKT4 447 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 WDR37Q9Y2I8 494 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CFAP20Q9Y6A4 193 aaKnown RBP10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 COMMD10Q9Y6G5 202 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 COLEC10Q9Y6Z7 277 aa10.76□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 KIF26BQ2KJY2 2108 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 IGHV1OR21-1A0A087WYE8 117 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 FAM149AA5PLN7 773 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 IQCF5A8MTL0 148 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 NTN3O00634 580 aaPredicted RBP10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 TP73O15350 636 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 ZNF500O60304 480 aaPredicted RBP10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 KDM1AO60341 852 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CSO75390 466 aaKnown RBP10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CPNE6O95741 557 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 TOP3BO95985 862 aaKnown RBP10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 PKMP14618 531 aaKnown RBP10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 AMD1P17707 334 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 SPINK2P20155 84 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CHRM3P20309 590 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CD151P48509 253 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CARSP49589 748 aaKnown RBP10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 INHBCP55103 352 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CLDN6P56747 220 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 SHC2P98077 582 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 MPP1Q00013 466 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 HSPA14Q0VDF9 509 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 TTLL9Q3SXZ7 439 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CTSL3PQ5NE16 218 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CDCP2Q5VXM1 449 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 DUS1LQ6P1R4 473 aaKnown RBP10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 KIAA0408Q6ZU52 694 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms