RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 SARDHQ9UL12 918 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 GABRQQ9UN88 632 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 UBIAD1Q9Y5Z9 338 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 H0YAE9 185 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 HAT1O14929 419 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 EGFRP00533 1210 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 MXD4Q14582 209 aaPredicted RBP14.22□□□□□ -0.13
CDT1-201ENST00000301019 TYSND1Q2T9J0 566 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 HIPK1Q86Z02 1210 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 UBQLNLQ8IYU4 475 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 FBXL6Q8N531 539 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 PTGR2Q8N8N7 351 aaPredicted RBP14.22□□□□□ -0.13
CDT1-201ENST00000301019 TRPM4Q8TD43 1214 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 FAM162AQ96A26 154 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 SNX18Q96RF0 628 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 TSEN34Q9BSV6 310 aaKnown RBP14.22□□□□□ -0.13
CDT1-201ENST00000301019 MLPHQ9BV36 600 aaPredicted RBP14.22□□□□□ -0.13
CDT1-201ENST00000301019 ABCB9Q9NP78 766 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 RIPK3Q9Y572 518 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 PCDHA9Q9Y5H5 950 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 UBXN8O00124 270 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 VIPP01282 170 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 APOA4P06727 396 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 DDCP20711 480 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 JAK3P52333 1124 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 ZNF280AP59817 542 aaPredicted RBP14.22□□□□□ -0.13
CDT1-201ENST00000301019 FLYWCH1Q4VC44 716 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 TMEM135Q86UB9 458 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 WDR49Q8IV35 697 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 PSTKQ8IV42 348 aaKnown RBP14.22□□□□□ -0.13
CDT1-201ENST00000301019 FAM151AQ8WW52 585 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 PDCD2LQ9BRP1 358 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 RHOBTB2Q9BYZ6 727 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 PDLIM7Q9NR12 457 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 ADGRE2Q9UHX3 823 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 CPSF3Q9UKF6 684 aaKnown RBP14.22□□□□□ -0.13
CDT1-201ENST00000301019 ADAM28Q9UKQ2 775 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 ASPDHA6ND91 283 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 PTPN3P26045 913 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 ETV3P41162 512 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 MAGEA12P43365 314 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 SMARCB1Q12824 385 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 GADL1Q6ZQY3 521 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 MICALL2Q8IY33 904 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 PHF10Q8WUB8 498 aaKnown RBP14.22□□□□□ -0.13
CDT1-201ENST00000301019 ROPN1LQ96C74 230 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 DUS3LQ96G46 650 aaKnown RBP14.22□□□□□ -0.13
CDT1-201ENST00000301019 NDFIP2Q9NV92 336 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 CPA4Q9UI42 421 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 CLCA3PQ9Y6N3 262 aa14.22□□□□□ -0.13
CDT1-201ENST00000301019 CNTNAP1P78357 1384 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 PABPN1LA6NDY0 278 aaKnown RBP14.21□□□□□ -0.13
CDT1-201ENST00000301019 PRR23AA6NEV1 266 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 B8ZZF3 427 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 H3BM21 787 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 DSCR3O14972 297 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 PTTG1O95997 202 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 HOXC6P09630 235 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 SULT1E1P49888 294 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 POU4F3Q15319 338 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 SURF1Q15526 300 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 ZNF181Q2M3W8 571 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 TOR1AIP2Q8NFQ8 470 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 VANGL1Q8TAA9 524 aaPredicted RBP14.21□□□□□ -0.13
CDT1-201ENST00000301019 LPAR1Q92633 364 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 ASIC4Q96FT7 647 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 CNDP2Q96KP4 475 aaKnown RBP14.21□□□□□ -0.13
CDT1-201ENST00000301019 NAT9Q9BTE0 207 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 CDADC1Q9BWV3 514 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 YTHDF1Q9BYJ9 559 aaKnown RBP14.21□□□□□ -0.13
CDT1-201ENST00000301019 LHX5Q9H2C1 402 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 TUBB1Q9H4B7 451 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 DPEP3Q9H4B8 488 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 POLG2Q9UHN1 485 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 COL2A1P02458 1487 aaPredicted RBP14.21□□□□□ -0.13
CDT1-201ENST00000301019 PLK4O00444 970 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 ZNF682O95780 498 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 YES1P07947 543 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 HSD17B1P14061 328 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 CA5AP35218 305 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 PIK3CGP48736 1102 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 DSC3Q14574 896 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 BAK1Q16611 211 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 FKBP1CQ5VVH2 108 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 UBE2Q1Q7Z7E8 422 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 YIPF7Q8N8F6 280 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 OR6B3Q8NGW1 331 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 RNF139Q8WU17 664 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 KHSRPQ92945 711 aaKnown RBP eCLIP14.21□□□□□ -0.13
CDT1-201ENST00000301019 MRPL57Q9BQC6 102 aaKnown RBP14.21□□□□□ -0.13
CDT1-201ENST00000301019 PDZD7Q9H5P4 517 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 ACTR8Q9H981 624 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 JPH1Q9HDC5 661 aaPredicted RBP14.21□□□□□ -0.13
CDT1-201ENST00000301019 ACOT13Q9NPJ3 140 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 NECTIN3Q9NQS3 549 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 REV1Q9UBZ9 1251 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 ORC6Q9Y5N6 252 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 GMPPBQ9Y5P6 360 aa14.21□□□□□ -0.13
CDT1-201ENST00000301019 FAM25AB3EWG3 89 aa14.2□□□□□ -0.14
CDT1-201ENST00000301019 FAM25CB3EWG5 89 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms