RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 SMARCB1Q12824 385 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 CDKL4Q5MAI5 379 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 SMARCD3Q6STE5 483 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 NIPA1Q7RTP0 329 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 PLEKHO2Q8TD55 490 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 LMLNQ96KR4 655 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 UQCC2Q9BRT2 126 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 ZNF350Q9GZX5 532 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 ALG2Q9H553 416 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 ACSS3Q9H6R3 686 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 MED31Q9Y3C7 131 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 BTNL10A8MVZ5 291 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 CACNB4O00305 520 aaPredicted RBP5.49□□□□□ -1.53
CPSF2-201ENST00000298875 TULP3O75386 442 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 FGF1P05230 155 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 IL12BP29460 328 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 HOXC12P31275 282 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 ADCYAP1R1P41586 468 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 CTBP2P56545 445 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 SP140Q13342 867 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 GTF2H2Q13888 395 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 CAPN13Q6MZZ7 669 aaPredicted RBP5.49□□□□□ -1.53
CPSF2-201ENST00000298875 GTF2H2CQ6P1K8 395 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 PGAP1Q75T13 922 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 RBM15BQ8NDT2 890 aaKnown RBP5.49□□□□□ -1.53
CPSF2-201ENST00000298875 ADAMTS15Q8TE58 950 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 LRTOMTQ8WZ04 291 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 JSRP1Q96MG2 331 aaPredicted RBP5.49□□□□□ -1.53
CPSF2-201ENST00000298875 SCGB3A2Q96PL1 93 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 TSSK3Q96PN8 268 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 FEM1AQ9BSK4 669 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 B3GNT4Q9C0J1 378 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 ACTR6Q9GZN1 396 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 GRHL1Q9NZI5 618 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 MAFFQ9ULX9 164 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 HES2Q9Y543 173 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 B8ZZF3 427 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 C22orf31O95567 290 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 COL6A1P12109 1028 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 CAPZA1P52907 286 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 AQP4P55087 323 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 ATP6V0D1P61421 351 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 MRPS5P82675 430 aaKnown RBP5.49□□□□□ -1.53
CPSF2-201ENST00000298875 GNA12Q03113 381 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 MVKQ03426 396 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 ADNP2Q6IQ32 1131 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 KIF18BQ86Y91 864 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 KIAA0319LQ8IZA0 1049 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 FAM13CQ8NE31 585 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 GPATCH1Q9BRR8 931 aaKnown RBP5.49□□□□□ -1.53
CPSF2-201ENST00000298875 SAV1Q9H4B6 383 aaPredicted RBP5.49□□□□□ -1.53
CPSF2-201ENST00000298875 ASAH2Q9NR71 780 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.49□□□□□ -1.53
CPSF2-201ENST00000298875 RBM47A0AV96 593 aaKnown RBP5.49□□□□□ -1.53
CPSF2-201ENST00000298875 RAB19A4D1S5 217 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 GRK5P34947 590 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 CDH13P55290 713 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 TAS2R40P59535 323 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 SF1Q15637 639 aaKnown RBP5.49□□□□□ -1.53
CPSF2-201ENST00000298875 C9orf64Q5T6V5 341 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 USP30Q70CQ3 517 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 GHDCQ8N2G8 530 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 CBR4Q8N4T8 237 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 LRRC4CQ9HCJ2 640 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 INTS10Q9NVR2 710 aaKnown RBP5.49□□□□□ -1.53
CPSF2-201ENST00000298875 FBXW2Q9UKT8 454 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 TCRBV5S4A2TA0A5A2 114 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 ELOVL7A1L3X0 281 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 FOXO6A8MYZ6 492 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 RPLP0P05388 317 aaKnown RBP5.49□□□□□ -1.53
CPSF2-201ENST00000298875 KIR3DL1P43629 444 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 ADAM8P78325 824 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 PHYKPLQ8IUZ5 450 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 CCDC54Q8NEL0 328 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 CLP1Q92989 425 aaKnown RBP5.49□□□□□ -1.53
CPSF2-201ENST00000298875 TRMOQ9BU70 441 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 MAB21L2Q9Y586 359 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 KNDC1Q76NI1 1749 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 ONECUT3O60422 494 aaPredicted RBP5.49□□□□□ -1.53
CPSF2-201ENST00000298875 DNTTP04053 509 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 PORP16435 677 aaPredicted RBP5.49□□□□□ -1.53
CPSF2-201ENST00000298875 ZNF132P52740 706 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 NAE1Q13564 534 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 MOGQ16653 247 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 TBC1D25Q3MII6 688 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 VPS26BQ4G0F5 336 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 DUS1LQ6P1R4 473 aaKnown RBP5.49□□□□□ -1.53
CPSF2-201ENST00000298875 GET4Q7L5D6 327 aaPredicted RBP5.49□□□□□ -1.53
CPSF2-201ENST00000298875 AP2M1Q96CW1 435 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 WDR55Q9H6Y2 383 aaPredicted RBP5.49□□□□□ -1.53
CPSF2-201ENST00000298875 SAGE1Q9NXZ1 904 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 A0A1W2PQH9 124 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 NOBOXO60393 691 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 CLDN9O95484 217 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 CD2P06729 351 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 ANXA4P09525 319 aaPredicted RBP5.49□□□□□ -1.53
CPSF2-201ENST00000298875 CXCR3P49682 368 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 RPL7AP62424 266 aaKnown RBP5.49□□□□□ -1.53
CPSF2-201ENST00000298875 VLDLRP98155 873 aa5.49□□□□□ -1.53
CPSF2-201ENST00000298875 FBXO48Q5FWF7 155 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms