RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 SMIM30A4D0T7 59 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 PURAQ00577 322 aaKnown RBP14.66□□□□□ -0.06
SPIDR-201ENST00000297423 PRKG2Q13237 762 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 RAPSNQ13702 412 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 TUBA3CQ13748 450 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 CCDC58Q4VC31 144 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 SOWAHCQ53LP3 525 aaPredicted RBP14.66□□□□□ -0.06
SPIDR-201ENST00000297423 STEAP3Q658P3 488 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 LCN8Q6JVE9 175 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 RFPL4BQ6ZWI9 263 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 SKA2Q8WVK7 121 aaPredicted RBP14.66□□□□□ -0.06
SPIDR-201ENST00000297423 TRIB2Q92519 343 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 TEKT5Q96M29 485 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 TBATAQ96M53 351 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 TOR4AQ9NXH8 423 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 SNX6Q9UNH7 406 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 POLR3HQ9Y535 204 aaPredicted RBP14.66□□□□□ -0.06
SPIDR-201ENST00000297423 ZFC3H1O60293 1989 aaKnown RBP14.66□□□□□ -0.06
SPIDR-201ENST00000297423 SLC22A1O15245 554 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 SEPT4O43236 478 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 PRKAR2AP13861 404 aaKnown RBP14.66□□□□□ -0.06
SPIDR-201ENST00000297423 IGFBP5P24593 272 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 GRK3P35626 688 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 CD86P42081 329 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 TECRLQ5HYJ1 363 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 DENND5AQ6IQ26 1287 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 PELI3Q8N2H9 469 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 UBE2FQ969M7 185 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 FAM120BQ96EK7 910 aaKnown RBP14.66□□□□□ -0.06
SPIDR-201ENST00000297423 GPR78Q96P69 363 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 KAT8Q9H7Z6 458 aaKnown RBP14.66□□□□□ -0.06
SPIDR-201ENST00000297423 GPN2Q9H9Y4 310 aaPredicted RBP14.66□□□□□ -0.06
SPIDR-201ENST00000297423 TRHDEQ9UKU6 1024 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 WDR81Q562E7 1941 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 PNMA8CA0A1B0GUJ8 204 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 RGS10O43665 173 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 PRDX3P30048 256 aaKnown RBP14.66□□□□□ -0.06
SPIDR-201ENST00000297423 AGTR2P50052 363 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 SNRPD2P62316 118 aaKnown RBP14.66□□□□□ -0.06
SPIDR-201ENST00000297423 ARHGEF6Q15052 776 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 CTU2Q2VPK5 515 aaKnown RBP14.66□□□□□ -0.06
SPIDR-201ENST00000297423 XAF1Q6GPH4 301 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 TPD52L3Q96J77 140 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 EGFL8Q99944 293 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 ZNF385DQ9H6B1 395 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 PLSCR3Q9NRY6 295 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 B3GNT3Q9Y2A9 372 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 YJEFN3A6XGL0 299 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 DPYSL4O14531 572 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 ZW10O43264 779 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 HMBSP08397 361 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 IMPDH1P20839 514 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 POU1F1P28069 291 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 CRYBB1P53674 252 aaPredicted RBP14.66□□□□□ -0.06
SPIDR-201ENST00000297423 WNT3AP56704 352 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 SELPLGQ14242 412 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 AAK1Q2M2I8 961 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 UNC50Q53HI1 259 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 TJAP1Q5JTD0 557 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 LARP4Q71RC2 724 aaKnown RBP eCLIP14.66□□□□□ -0.062e-6■■■■■ 38.7
SPIDR-201ENST00000297423 DTWD1Q8N5C7 304 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 AMER2Q8N7J2 671 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 TMEM125Q96AQ2 219 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 GALPQ9UBC7 116 aa14.66□□□□□ -0.06
SPIDR-201ENST00000297423 AFF4Q9UHB7 1163 aaKnown RBP14.66□□□□□ -0.06
SPIDR-201ENST00000297423 A0A1W2PQ72 361 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 MTSS1O43312 755 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 BEST1O76090 585 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 RECQL4O94761 1208 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 OR4F21O95013 312 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 RAP2AP10114 183 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 SERPINH1P50454 418 aaKnown RBP14.65□□□□□ -0.06
SPIDR-201ENST00000297423 LRIT3Q3SXY7 679 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 WDR45BQ5MNZ6 344 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 STRADAQ7RTN6 431 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 TTC39CQ8N584 583 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 RMDN1Q96DB5 314 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 TNIP3Q96KP6 325 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 SLX1AQ9BQ83 275 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 APOL5Q9BWW9 433 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 AXIN1O15169 862 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 UGT2B11O75310 529 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 SH3BGRLO75368 114 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 PPP5CP53041 499 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 GEMP55040 296 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 HIST2H2ACQ16777 129 aaPredicted RBP14.65□□□□□ -0.06
SPIDR-201ENST00000297423 FBXO47Q5MNV8 452 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 SPRED1Q7Z699 444 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 ADHFE1Q8IWW8 467 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 ADAMTS16Q8TE57 1224 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 EFHD2Q96C19 240 aaPredicted RBP14.65□□□□□ -0.06
SPIDR-201ENST00000297423 MOV10Q9HCE1 1003 aaKnown RBP14.65□□□□□ -0.06
SPIDR-201ENST00000297423 UBQLN1Q9UMX0 589 aaKnown RBP14.65□□□□□ -0.06
SPIDR-201ENST00000297423 DOCK3Q8IZD9 2030 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 PLXNA1Q9UIW2 1896 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 A0A1W2PP18 115 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 CCDC162PA2VCL2 907 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 PRMT5O14744 637 aaPredicted RBP14.65□□□□□ -0.06
SPIDR-201ENST00000297423 DDX5P17844 614 aaKnown RBP14.65□□□□□ -0.06
SPIDR-201ENST00000297423 EFNA1P20827 205 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms