RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 DGKQP52824 942 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 ILF3Q12906 894 aaKnown RBP eCLIP13.26□□□□□ -0.29
HPS3-201ENST00000296051 CTC1Q2NKJ3 1217 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 PLA2G4EQ3MJ16 856 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 ZNF57Q68EA5 555 aaPredicted RBP13.26□□□□□ -0.29
HPS3-201ENST00000296051 FAM9CQ8IZT9 166 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 ZNF655Q8N720 491 aaPredicted RBP13.26□□□□□ -0.29
HPS3-201ENST00000296051 S100ZQ8WXG8 99 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 RAD9AQ99638 391 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 SLC29A1Q99808 456 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 POLE4Q9NR33 117 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 ABCB8Q9NUT2 735 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 ZFP37Q9Y6Q3 630 aaPredicted RBP13.26□□□□□ -0.29
HPS3-201ENST00000296051 BCKDKO14874 412 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 PRKCGP05129 697 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 CAPN1P07384 714 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 DHRS4L1P0CG22 281 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 SLC11A1P49279 550 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 COPZ1P61923 177 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 CDKL1Q00532 357 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 PHYKPLQ8IUZ5 450 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 C12orf76Q8N812 135 aaPredicted RBP13.26□□□□□ -0.29
HPS3-201ENST00000296051 NACC2Q96BF6 587 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 AP2M1Q96CW1 435 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 PTGDR2Q9Y5Y4 395 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 PMF1-BGLAPU3KQ54 211 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 SNAP29O95721 258 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 GPIP06744 558 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 PPP2R1BP30154 601 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 GJA8P48165 433 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 TTPAP49638 278 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 SEMG2Q02383 582 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 INO80DQ53TQ3 878 aaPredicted RBP13.26□□□□□ -0.29
HPS3-201ENST00000296051 KBTBD6Q86V97 674 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 HID1Q8IV36 788 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 OR52J3Q8NH60 311 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 MYO19Q96H55 970 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 HNRNPABQ99729 332 aaKnown RBP13.26□□□□□ -0.29
HPS3-201ENST00000296051 XYLT2Q9H1B5 865 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 IGSF9Q9P2J2 1179 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 PSME2Q9UL46 239 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 hCG_2039718K7EN88 272 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 K7EPI3 171 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 MLYCDO95822 493 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 ENO2P09104 434 aaPredicted RBP13.25□□□□□ -0.29
HPS3-201ENST00000296051 COL6A1P12109 1028 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 ELK4P28324 431 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 GSK3BP49841 420 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 LRRC73Q5JTD7 316 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 TAC4Q86UU9 113 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 P2RY8Q86VZ1 359 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 ARFGAP1Q8N6T3 406 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 TXNDC5Q8NBS9 432 aaKnown RBP13.25□□□□□ -0.29
HPS3-201ENST00000296051 GTPBP2Q9BX10 602 aaKnown RBP13.25□□□□□ -0.29
HPS3-201ENST00000296051 MAGEL2Q9UJ55 1249 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 KNTC1P50748 2209 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 C4AP0C0L4 1744 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 C4BP0C0L5 1744 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 BBIP1A8MTZ0 92 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 FAM25AB3EWG3 89 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 FAM25CB3EWG5 89 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 FAM25GB3EWG6 89 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 E9PAM4 449 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 PRR23D1E9PI22 279 aaPredicted RBP13.25□□□□□ -0.29
HPS3-201ENST00000296051 PRR23D2P0DMB1 279 aaPredicted RBP13.25□□□□□ -0.29
HPS3-201ENST00000296051 COX7A2P14406 83 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 RRM2P31350 389 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 CRATP43155 626 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 RPS24P62847 133 aaKnown RBP13.25□□□□□ -0.29
HPS3-201ENST00000296051 TGFBIQ15582 683 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 ATAD3BQ5T9A4 648 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 DENND5AQ6IQ26 1287 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 ADGRG6Q86SQ4 1221 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 NKAPQ8N5F7 415 aaKnown RBP13.25□□□□□ -0.29
HPS3-201ENST00000296051 PANX1Q96RD7 426 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 STRA6Q9BX79 667 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 HDHD2Q9H0R4 259 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 OCEL1Q9H607 264 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 EIF2B4Q9UI10 523 aaKnown RBP13.25□□□□□ -0.29
HPS3-201ENST00000296051 ERVW-1Q9UQF0 538 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 FCF1Q9Y324 198 aaKnown RBP13.25□□□□□ -0.29
HPS3-201ENST00000296051 IQCF5A8MTL0 148 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 CAPN14A8MX76 684 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 IGFBP5P24593 272 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 CXCR2P25025 360 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 C1QTNF8P60827 252 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 TOP3AQ13472 1001 aaPredicted RBP13.25□□□□□ -0.29
HPS3-201ENST00000296051 FAM187BQ17R55 369 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 ZNF549Q6P9A3 640 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 CYP20A1Q6UW02 462 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 VN1R5Q7Z5H4 357 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 RAB2BQ8WUD1 216 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 LRRC58Q96CX6 371 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 TOR4AQ9NXH8 423 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 PRKAB1Q9Y478 270 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 TMCC2O75069 709 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 MEP1AQ16819 746 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 TRIQKQ629K1 86 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 TPGS2Q68CL5 300 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 C15orf39Q6ZRI6 1047 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms