RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 DPPA4Q7L190 304 aa16.55■□□□□ 0.24
CPSF4-201ENST00000292476 ISCA2Q86U28 154 aa16.55■□□□□ 0.24
CPSF4-201ENST00000292476 PIANPQ8IYJ0 282 aa16.55■□□□□ 0.24
CPSF4-201ENST00000292476 EFCAB3Q8N7B9 438 aa16.55■□□□□ 0.24
CPSF4-201ENST00000292476 KCNJ9Q92806 393 aa16.55■□□□□ 0.24
CPSF4-201ENST00000292476 EDAQ92838 391 aa16.55■□□□□ 0.24
CPSF4-201ENST00000292476 P2RY13Q9BPV8 354 aa16.55■□□□□ 0.24
CPSF4-201ENST00000292476 ERVK-6Q9BXR3 956 aa16.55■□□□□ 0.24
CPSF4-201ENST00000292476 CLPBQ9H078 707 aa16.55■□□□□ 0.24
CPSF4-201ENST00000292476 CRLS1Q9UJA2 301 aa16.55■□□□□ 0.24
CPSF4-201ENST00000292476 G3BP2Q9UN86 482 aaKnown RBP16.55■□□□□ 0.24
CPSF4-201ENST00000292476 FNDC3AQ9Y2H6 1198 aaKnown RBP16.55■□□□□ 0.24
CPSF4-201ENST00000292476 TRAF6Q9Y4K3 522 aa16.55■□□□□ 0.24
CPSF4-201ENST00000292476 TRBV5-4A0A0C4DH59 114 aa16.54■□□□□ 0.24
CPSF4-201ENST00000292476 BBIP1A8MTZ0 92 aa16.54■□□□□ 0.24
CPSF4-201ENST00000292476 H0Y858 1186 aa16.54■□□□□ 0.24
CPSF4-201ENST00000292476 H0YJX3 145 aa16.54■□□□□ 0.24
CPSF4-201ENST00000292476 NARSO43776 548 aaKnown RBP16.54■□□□□ 0.24
CPSF4-201ENST00000292476 C8BP07358 591 aa16.54■□□□□ 0.24
CPSF4-201ENST00000292476 CTSLP07711 333 aa16.54■□□□□ 0.24
CPSF4-201ENST00000292476 FGF4P08620 206 aa16.54■□□□□ 0.24
CPSF4-201ENST00000292476 CHRM1P11229 460 aaPredicted RBP16.54■□□□□ 0.24
CPSF4-201ENST00000292476 FMO4P31512 558 aa16.54■□□□□ 0.24
CPSF4-201ENST00000292476 DPP6P42658 865 aa16.54■□□□□ 0.24
CPSF4-201ENST00000292476 SPINT3P49223 89 aa16.54■□□□□ 0.24
CPSF4-201ENST00000292476 DCDC1P59894 354 aa16.54■□□□□ 0.24
CPSF4-201ENST00000292476 PSME3P61289 254 aa16.54■□□□□ 0.24
CPSF4-201ENST00000292476 FASTKQ14296 549 aaKnown RBP16.54■□□□□ 0.24
CPSF4-201ENST00000292476 PTPRRQ15256 657 aa16.54■□□□□ 0.24
CPSF4-201ENST00000292476 ZNF549Q6P9A3 640 aa16.54■□□□□ 0.24
CPSF4-201ENST00000292476 RAB44Q7Z6P3 723 aaPredicted RBP16.54■□□□□ 0.24
CPSF4-201ENST00000292476 TSPAN33Q86UF1 283 aa16.54■□□□□ 0.24
CPSF4-201ENST00000292476 SLC44A3Q8N4M1 653 aa16.54■□□□□ 0.24
CPSF4-201ENST00000292476 NKAPQ8N5F7 415 aaKnown RBP16.54■□□□□ 0.24
CPSF4-201ENST00000292476 BHLHE22Q8NFJ8 381 aaPredicted RBP16.54■□□□□ 0.24
CPSF4-201ENST00000292476 ZFAND2BQ8WV99 257 aa16.54■□□□□ 0.24
CPSF4-201ENST00000292476 ANKRD49Q8WVL7 239 aa16.54■□□□□ 0.24
CPSF4-201ENST00000292476 DUS3LQ96G46 650 aaKnown RBP16.54■□□□□ 0.24
CPSF4-201ENST00000292476 DCUN1D1Q96GG9 259 aa16.54■□□□□ 0.24
CPSF4-201ENST00000292476 PCDH12Q9NPG4 1184 aa16.54■□□□□ 0.24
CPSF4-201ENST00000292476 C11orf16Q9NQ32 467 aa16.54■□□□□ 0.24
CPSF4-201ENST00000292476 NFKBIL1Q9UBC1 381 aaPredicted RBP16.54■□□□□ 0.24
CPSF4-201ENST00000292476 GNPTGQ9UJJ9 305 aa16.54■□□□□ 0.24
CPSF4-201ENST00000292476 PCDHGA7Q9Y5G6 932 aa16.54■□□□□ 0.24
CPSF4-201ENST00000292476 KIAA1549LQ6ZVL6 1849 aa16.54■□□□□ 0.24
CPSF4-201ENST00000292476 AGAP14A8MT82 685 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 E5RI56 91 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 GPC4O75487 556 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 SNRPB2P08579 225 aaKnown RBP16.53■□□□□ 0.24
CPSF4-201ENST00000292476 LHCGRP22888 699 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 ACRV1P26436 265 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 CHN2P52757 468 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 LRP8Q14114 963 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 PDK3Q15120 406 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 RNF220Q5VTB9 566 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 FBXL19Q6PCT2 694 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 LARP4Q71RC2 724 aaKnown RBP eCLIP16.53■□□□□ 0.24
CPSF4-201ENST00000292476 SERPINA9Q86WD7 417 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 RAB7BQ96AH8 199 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 TFB2MQ9H5Q4 396 aaKnown RBP16.53■□□□□ 0.24
CPSF4-201ENST00000292476 C8orf33Q9H7E9 229 aaPredicted RBP16.53■□□□□ 0.24
CPSF4-201ENST00000292476 CYP4F12Q9HCS2 524 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 CACNA2D2Q9NY47 1150 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 NDUFA13Q9P0J0 144 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 TECTAO75443 2155 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 CFLARO15519 480 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 EPHX1P07099 455 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 CD1EP15812 388 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 CD1DP15813 335 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 PKNOX1P55347 436 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 ATP6V0D1P61421 351 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 MRPS22P82650 360 aaKnown RBP16.53■□□□□ 0.24
CPSF4-201ENST00000292476 FOLH1Q04609 750 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 MESP2Q0VG99 397 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 LRRC36Q1X8D7 754 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 REP15Q6BDI9 236 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 SDE2Q6IQ49 451 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 C8orf82Q6P1X6 216 aaPredicted RBP16.53■□□□□ 0.24
CPSF4-201ENST00000292476 GK5Q6ZS86 529 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 NRSN1Q8IZ57 195 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 CLYBLQ8N0X4 340 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 ROPN1LQ96C74 230 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 MARK4Q96L34 752 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 BIRC8Q96P09 236 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 NPAS2Q99743 824 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 P2RY12Q9H244 342 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 EPB41L1Q9H4G0 881 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 ALG9Q9H6U8 611 aa16.53■□□□□ 0.24
CPSF4-201ENST00000292476 TRMT6Q9UJA5 497 aaKnown RBP16.53■□□□□ 0.24
CPSF4-201ENST00000292476 A8MX80 341 aa16.52■□□□□ 0.23
CPSF4-201ENST00000292476 GAPDHSO14556 408 aaPredicted RBP16.52■□□□□ 0.23
CPSF4-201ENST00000292476 ZNF37AP17032 561 aaPredicted RBP16.52■□□□□ 0.23
CPSF4-201ENST00000292476 IL12RB1P42701 662 aa16.52■□□□□ 0.23
CPSF4-201ENST00000292476 NSG1P42857 185 aa16.52■□□□□ 0.23
CPSF4-201ENST00000292476 CDKN1CP49918 316 aaPredicted RBP16.52■□□□□ 0.23
CPSF4-201ENST00000292476 GALK1P51570 392 aa16.52■□□□□ 0.23
CPSF4-201ENST00000292476 SH3BGRP55822 239 aaPredicted RBP16.52■□□□□ 0.23
CPSF4-201ENST00000292476 STX1BP61266 288 aa16.52■□□□□ 0.23
CPSF4-201ENST00000292476 MS4A2Q01362 244 aa16.52■□□□□ 0.23
CPSF4-201ENST00000292476 ENPP2Q13822 863 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms