RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 MFSD11O43934 449 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 HOXD13P35453 343 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 OMPP47874 163 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 GCNT6Q5T4J0 391 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 CPTPQ5TA50 214 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 OGFOD2Q6N063 350 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 OR8H3Q8N146 312 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 CANT1Q8WVQ1 401 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 UFD1Q92890 307 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 C11orf24Q96F05 449 aaPredicted RBP17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 RASSF1Q9NS23 344 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 CCNB2O95067 398 aa17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 GPX6P59796 221 aa17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 RAB2AP61019 212 aa17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 KCNA10Q16322 511 aa17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 MYLK3Q32MK0 819 aa17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 COLEC12Q5KU26 742 aa17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 NETO2Q8NC67 525 aa17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 LRRC58Q96CX6 371 aa17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 EVA1BQ9NVM1 165 aa17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 SETD1AO15047 1707 aaKnown RBP17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 ZNF541Q9H0D2 1346 aa17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 GABRDO14764 452 aa17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 APOL3O95236 402 aa17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 SELPP16109 830 aa17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 PBLDP30039 288 aaPredicted RBP17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 ZNF516Q92618 1163 aa17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 SMURF2Q9HAU4 748 aa17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 NECTIN3Q9NQS3 549 aa17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 HMGXB4Q9UGU5 601 aa17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 MRPS7Q9Y2R9 242 aaKnown RBP17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 A0A0G2JLL6 359 aaPredicted RBP17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 C1QTNF3-AMACRE9PGA6 284 aa17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 TSPAN1O60635 241 aa17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 ERN1O75460 977 aaKnown RBP17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 HDCP19113 662 aa17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 ACOX1Q15067 660 aa17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 PRRT2Q7Z6L0 340 aaPredicted RBP17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 ANKFN1Q8N957 763 aa17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 B3GNT3Q9Y2A9 372 aa17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 RGPD2P0DJD1 1756 aa17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 LRP6O75581 1613 aa17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 ZNF655Q8N720 491 aaPredicted RBP17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 CMASQ8NFW8 434 aaPredicted RBP17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 SLC13A3Q8WWT9 602 aa17.29■□□□□ 0.36
PCDHA13-201ENST00000289272 FANCGO15287 622 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 CTNNB1P35222 781 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 CDH13P55290 713 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 SRSF11Q05519 484 aaKnown RBP17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 C6orf183Q5T699 404 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 TMEM214Q6NUQ4 689 aaKnown RBP17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 TRMT11Q7Z4G4 463 aaKnown RBP17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 CCDC3Q9BQI4 270 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 GTPBP2Q9BX10 602 aaKnown RBP17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 ATP13A3Q9H7F0 1226 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 FKBP14Q9NWM8 211 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 NUP188Q5SRE5 1749 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 AP3D1O14617 1153 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 IFNW1P05000 195 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 PKMP14618 531 aaKnown RBP17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 MAPK12P53778 367 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 CYP20A1Q6UW02 462 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 MOB2Q70IA6 237 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 OR4A15Q8NGL6 344 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 LPPQ93052 612 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 OSGEPL1Q9H4B0 414 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 ZNF214Q9UL59 606 aaPredicted RBP17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 PCDHGA3Q9Y5H0 932 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 MRPS14O60783 128 aaKnown RBP17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 GUCA1AP43080 201 aaPredicted RBP17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 HLCSP50747 726 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 PAMR1Q6UXH9 720 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 SLC24A5Q71RS6 500 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 ANKRD13BQ86YJ7 626 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 COL21A1Q96P44 957 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 SEMA3CQ99985 751 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 SYT17Q9BSW7 474 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 RAB23Q9ULC3 237 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 SLC45A1Q9Y2W3 748 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 PTPRJQ12913 1337 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 WEE1P30291 646 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 ASPAP45381 313 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 VBP1P61758 197 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 SETMARQ53H47 684 aaPredicted RBP17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 FBXL19Q6PCT2 694 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 GALNT6Q8NCL4 622 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 DENND1AQ8TEH3 1009 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 FRMD6Q96NE9 622 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 FEM1AQ9BSK4 669 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 DSN1Q9H410 356 aa17.28■□□□□ 0.36
PCDHA13-201ENST00000289272 A0A1W2PPW3 197 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 SOWAHBA6NEL2 793 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 FAM86C2PA6NEL3 165 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 ANKDD1BA6NHY2 528 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 ITGA10O75578 1167 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 RASAL1O95294 804 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 DNAJB13P59910 316 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 HERVK_113P63132 956 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 PEX6Q13608 980 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms